ID   AB233096; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB233096;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (P1 protein), partial cds,
DE   isolate: KGN60J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 7d9cd6314be0fbf3e1d418cb44736e88.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KGN60J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8H0"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8H0"
FT                   /protein_id="BAF36866.1"
FT                   /translation="MAAVTFATAITNTTASRSASTGIVQFGNFPSVPLRSTVATTATTP
FT                   VVQPKLYTVQFGSLDPIVVKGKAGSSAKATCQQPSGEINASLKEAAALEVAKPKPNAVL
FT                   RMHEEINKERALLLDWETSLTRRSYGIADNEKVIMTARGISKIVLRSSRAMKQKRARER
FT                   RRAQQPIVLRWEPKLSTISIGGGPSANMIETEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVIHLLGKRARRDLL
FT                   AGAEENHFIDTLSTYSGNRKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVVRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 354 A; 236 C; 279 G; 217 T; 0 other;
     atggcagcag tcacatttgc aaccgcaatc actaacacca ccgcaagcag atcagcatcc        60
     accggaatag tacaatttgg gaatttccca tcagtgccgt tgcgatccac cgtcgctacc       120
     acagctacca ccccagtggt acaacccaag ctgtacacag tacagttcgg aagccttgac       180
     ccgattgtcg tcaagggtaa agcagggtcc tctgctaagg caacctgcca gcagcctagt       240
     ggtgaaataa acgctagcct caaggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgt taaggatgca cgaggaaata aacaaggaga gagcactcct cttagactgg       360
     gaaaccagtt taacaaggcg ctcatatggc attgctgaca acgagaaggt catcatgaca       420
     gctcgtggta ttagcaaaat agtgcttagg agctcaaggg caatgaaaca aaagcgcgca       480
     agagaaaggc gcagggcaca acaaccaatt gtgttgagat gggagcccaa gttgagcaca       540
     atctcaattg gaggaggacc ctccgcaaac atgatcgaga cagaagaggt tcgcacgaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagtcc attaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtaca agtaatacat ttgctcggaa agcgggcacg acgcgacctg       840
     ttggctggtg cagaagagaa ccacttcatc gacaccctaa gcacctattc aggaaataga       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attctgactc agaagcagag cagaagtcct tcgcaagcct ttgtggttcg aggagaacat      1020
     gaagggaagt tgtatgatgc cagagttaag gtcactaagg taatgagtca caaaatcata      1080
     cactat                                                                 1086
//