ID   AB233088; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB233088;
XX
DT   17-NOV-2006 (Rel. 89, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein (P1 protein), partial cds,
DE   isolate: KGD851J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 3952a8f30396ee30804f962bffbe29a4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KGD851J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A0P8G2"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:A0P8G2"
FT                   /protein_id="BAF36858.1"
FT                   /translation="MAAVTFATAITNTTASRSASTGMVQFGDFPSVPLRSTVTTTATTP
FT                   VVQPKLYTVQFGSLDPIVVKGKAGSSAKATCQQPSGEINASLKEAAALEVAKPKPNAVL
FT                   RMHEEMNKERALFLDWETSLTRRSYGIADNEKVIMTARGVSKIVLRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPKLSTISIGGGPSANMIEAEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVEHLLGKRARRDLL
FT                   TGAEENHFIDTLSTYSGNRKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 353 A; 235 C; 282 G; 216 T; 0 other;
     atggcagcag tcacatttgc aaccgcaatc actaacacca ccgcaagcag atcagcatcc        60
     accggaatgg tacaatttgg ggatttccca tcagtgccgt tgcgatccac cgtcactacc       120
     acagctacca ccccagtggt acaacccaag ctgtacacag tacagttcgg aagccttgac       180
     ccgattgtcg tcaagggtaa agcagggtcc tctgctaagg caacctgcca gcagcctagc       240
     ggtgaaataa acgctagcct caaggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgt taaggatgca cgaggaaatg aacaaggaga gagcactctt cttagactgg       360
     gaaaccagtt taacaaggcg ctcatatggc attgctgaca acgagaaggt catcatgaca       420
     gctcgtggtg ttagcaaaat agtgcttagg agctcaaggg caatgaaaca aaagcgcgca       480
     agagaaaggc gcagggcaca acaaccaatt gtgttgaaat gggagcccaa gttgagcaca       540
     atctcaattg gaggaggacc ctccgcaaac atgatcgagg cagaagaggt tcgcacgaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatttttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagtcc attaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtaca agtagaacac ttgctcggaa agcgggcacg acgcgacctg       840
     ttgactggtg cagaagagaa ccacttcatt gacaccctaa gcacatactc agggaatagg       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attctgactc agaagcagag cagaagtcct tcacaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgatgc cagagttaag gtcactaagg taatgagtca caaaatcata      1080
     cactat                                                                 1086
//