ID   AB233042; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB233042;
XX
DT   23-MAY-2007 (Rel. 91, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein (CP protein), partial cds,
DE   isolate: KGD946J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; e94c5f48d679c0e142dea97cf9ae3b75.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KGD946J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A5HUB4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A5HUB4"
FT                   /protein_id="BAF62650.1"
FT                   /translation="AGETLDAGLTDEQKQAEKERKERERAERERERQKQLTLKKGKNAA
FT                   LEESERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..>864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 864 BP; 286 A; 179 C; 230 G; 169 T; 0 other;
     gcaggtgaaa cacttgatgc aggcctgaca gatgagcaga aacaggcaga aaaggagaga        60
     aaggagagag agagagcaga gagagagcga gagaggcaaa agcagctaac gcttaagaaa       120
     ggcaaaaacg cagcactaga ggaaagcgaa cgtgacaacg aagtgaatgc cggaacctct       180
     ggaactttta gtgtgcctag gctcaaaagc ctaacgagca aaatgcgagt gccaaagtac       240
     gagaaaagag tagctctcaa tctcgatcat ctgattctgt acacgccgga gcagacggat       300
     ctatccaata cgcgttcaac gcggaagcaa ttcgacactt ggttcgaagg tgtcatggct       360
     gactacgagc taacggagga taaaatgcaa ataattctca atggtttaat ggtctggtgc       420
     attgagaatg gaacctcccc aaatataaac ggaatgtggg tgatgatgga tggtgatgat       480
     caggtggaat tcccgatcaa accgctcatt gatcacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaac ttaaccgaca tgagcttagc tcggtacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaggc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aataatttgt tcggcttgga tggtaacgtc       780
     ggcacaacgg tagagaacac ggaaaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gtta                                              864
//