ID   AB233037; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB233037;
XX
DT   23-MAY-2007 (Rel. 91, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Turnip mosaic virus gene for polyprotein (CP protein), partial cds,
DE   isolate: KGD54J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (30-AUG-2005) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1111/j.1365-294X.2006.03094.x.
RX   PUBMED; 17107475.
RA   Tomitaka Y., Ohshima K.;
RT   "A phylogeographical study of the Turnip mosaic virus population in East
RT   Asia reveals an 'emergent' lineage in Japan";
RL   Mol. Ecol. 15(14):4437-4457(2006).
XX
DR   MD5; 1bbcd622f16e385bf4b1229123c65c97.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KGD54J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A5HUA9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A5HUA9"
FT                   /protein_id="BAF62645.1"
FT                   /translation="AGETLDAGLTEEQKQAEKERKERERSEKERERQRQLALKKGKNAA
FT                   QEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..>864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 864 BP; 284 A; 178 C; 230 G; 172 T; 0 other;
     gcaggtgaga cgcttgatgc cggtctaaca gaagagcaga agcaggctga aaaggagaga        60
     aaggagaggg agagatcaga gaaagagcga gaaaggcaaa gacagctagc gcttaagaaa       120
     ggcaaaaacg cagcacaaga agagggcgaa cgtgacaatg aagtaaacgc cggaacttcc       180
     ggaactttta gcgtgcctag actcaaaagt cttacaagca aaatgcgtgt gccgaagtat       240
     gagaaaagag tagctctcaa cctcgatcat ttgatcttat acacgccgga gcagacagat       300
     ttatccaaca cgcgttcaac gcggaagcag tttgacactt ggtttgaagg tgtcatggct       360
     gactatgagc taacggagga taaaatgcaa ataattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgatacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaggc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aacaatttgt tcggcttgga tggaaacgtt       780
     ggtacaacgg tagagaacac ggaaaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttgcttg gcgttaaggg gtta                                              864
//