ID AB232926; SV 1; linear; genomic RNA; STD; VRL; 4261 BP. XX AC AB232926; XX DT 19-MAR-2008 (Rel. 95, Created) DT 17-MAY-2011 (Rel. 108, Last updated, Version 4) XX DE Melon necrotic spot virus genomic RNA, complete genome, isolate: Kochi. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; OC Tolivirales; Tombusviridae; Procedovirinae; Gammacarmovirus; OC Gammacarmovirus melonis. XX RN [1] RP 1-4261 RA Ohki T., Sako I., Takeuchi S., Tsuda S., Honda Y.; RT ; RL Submitted (25-AUG-2005) to the INSDC. RL Contact:Takehiro Ohki National agricultural research center, Department of RL Plant Pathology; Kan-nondai, Tsukuba, Ibaraki 305-8666, Japan XX RN [2] RA Ohki T., Sako I., Kanda A., Mochizuki T., Honda Y., Tsuda S.; RT "A New Strain of Melon necrotic spot virus that Is Unable to Systemically RT Infect Cucumis melo"; RL Phytopathology 11:1165-1170(2008). XX DR MD5; 0dc79560a05a8f370c9952989ebe7d97. DR EuropePMC; PMC5356068; 28302791. XX FH Key Location/Qualifiers FH FT source 1..4261 FT /organism="Melon necrotic spot virus" FT /isolate="Kochi" FT /mol_type="genomic RNA" FT /isolation_source="watermelon" FT /note="Melon necrotic spot virus watermelon strain Kochi FT isolate" FT /db_xref="taxon:11987" FT CDS 94..2469 FT /codon_start=1 FT /transl_table=1 FT /transl_except=(pos:898..900,aa:OTHER) FT /gene="p89" FT /product="89K protein" FT /note="Putative RNA-dependent RNA polymerase produced by a FT readthrouth of the amber codon; replicase" FT /db_xref="GOA:B1B1T3" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B1B1T3" FT /protein_id="BAG13035.1" FT /translation="METGLKFLVSGGLATSSVFRKVNAESLLDSSRASSDIIATVHGSM FT INAVRDDCAKVAKVALCVGMAYAVWKAGSLWVRRRPVLRNAIVRGGEEVMEHITVGIDE FT DEDSDAEDREEIIVGSIGIGVSRNVSPERKLKRRHRSKPFIRKIVHLTKNHFGGCPESS FT KSNVMAVSKFVYDLCKQHNCLPHQTRMIISVAVPLVLSPDMYDISSRALLNSETLNENR FT AKLDRLKTLDGWLSNLICHPLSAKAWRRTIDNLCGLPDWKAFRLINXGCLEELAGFCTS FT VHRGTHPDMTEYPQERPVKTRKLFCLGGVGTSVQFNVHNNSMRNLRRGLMERVFYVENE FT KKELEPAPKPLDGVFGNLAWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLGVQRRDAYLKTFVKAEKINTTRKPDPAPRVIQPRNVRYNVEVGRFLRRFEHYLYRG FT IDEIWNGPTVIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSIPALQWEHSVY FT LDAFCQDSYLAELLSWQLENKGVGYASDGMIRYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRRRGMRARLLNNGDDCVVIVEKECAAEVKSGMVRHWRQFGFQCELECDADIFEQIE FT FCQMRPVYDGEKYVMVRNPLISLSKDAYSVGPWNSINHARKWVNAVGLCGMSLTGGIPV FT VQSYYNMFIRNTKTVNSSSILRDVSFASGFRELARLGNRSYRNISEESRFSFYLAFGIT FT PDLQRAMESDYDAHTIDWGFVPQGNPRIQPISWTLNAL" FT CDS 94..900 FT /codon_start=1 FT /transl_table=1 FT /gene="p29" FT /product="29K protein" FT /db_xref="UniProtKB/TrEMBL:B1B1T4" FT /protein_id="BAG13036.1" FT /translation="METGLKFLVSGGLATSSVFRKVNAESLLDSSRASSDIIATVHGSM FT INAVRDDCAKVAKVALCVGMAYAVWKAGSLWVRRRPVLRNAIVRGGEEVMEHITVGIDE FT DEDSDAEDREEIIVGSIGIGVSRNVSPERKLKRRHRSKPFIRKIVHLTKNHFGGCPESS FT KSNVMAVSKFVYDLCKQHNCLPHQTRMIISVAVPLVLSPDMYDISSRALLNSETLNENR FT AKLDRLKTLDGWLSNLICHPLSAKAWRRTIDNLCGLPDWKAFRLIN" FT CDS 2448..2645 FT /codon_start=1 FT /transl_table=1 FT /gene="p7A" FT /product="p7A protein" FT /db_xref="GOA:B1B1T6" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:B1B1T6" FT /protein_id="BAG13038.1" FT /translation="MDSQRTVEQQNPRGRSRDRDDGGGKQKNSMGRKIANDAITESKQG FT VMGASVYIADKIKVNISFNF" FT CDS 2649..2834 FT /codon_start=1 FT /transl_table=1 FT /gene="p7B" FT /product="p7B protein" FT /db_xref="GOA:B1B1T7" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:B1B1T7" FT /protein_id="BAG13039.1" FT /translation="MGCYRCDSGPGDYSGPLLILFLAFVFFYITSLGPHGNTYVHLSDN FT SSVKTQYVGISTNGND" FT CDS 2821..3993 FT /codon_start=1 FT /transl_table=1 FT /gene="p42" FT /product="capsid protein" FT /db_xref="GOA:B1B1T8" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B1B1T8" FT /protein_id="BAG13040.1" FT /translation="MAMIKRVNKLPTVQMAKQLLPLVPSAKLVNNAIDVVPLVVQGGKK FT LSKAAKRLLGRYGGNITYTEGAKPGSVSAPVAISQRVAGMKPRFTQTAGSVKIVHRELI FT TTILPADSLTVNNGDTNTGKYRVNPSNNALFTWLQGQAQLYDMYRFTKLRFTYIPTTNT FT TATGRVSVIWDKDSQDPLPQDRAAISSYAHYADSAPWAENYLVVPCDNVWRYMNDTNAV FT DRKLVDFGQLIFATYSSVSSVPHGDLYVEYTVEFKEPQPISGMTCMFDRDVSLGPVGST FT IRGSNYISDTNVVTSGGNVGVFLNVPGTYLVTLVINAVTVGGLTFPGNGKLIGSSLNVT FT GGGATSLSFTVASTGVPNASAATFNVGSVVTPTRVRLTISRSSPETAYLA" XX SQ Sequence 4261 BP; 1089 A; 901 C; 1075 G; 1196 T; 0 other; cggaaatctc tagccgattc cccgtgctct gtgcccgtcc tggcaagtct ttcgagatat 60 tggcgaggtt aaccgtaata acgtaggcta gcaatggaaa ctggattgaa atttctcgtc 120 tctggaggtt tagccacctc ttctgttttt cgcaaggtaa atgcagagag tttattggat 180 tcgtcccgtg cttcatctga cattatagcc actgtgcatg gatcaatgat taatgccgtt 240 cgtgacgatt gtgctaaagt ggccaaggtt gctctgtgcg ttggtatggc ttacgcagtc 300 tggaaagctg gatccctttg ggttcgtcgt cgaccagtcc tgcggaacgc catagtgcgc 360 ggtggagaag aagtcatgga gcatatcact gttggtattg atgaagatga ggatagtgat 420 gctgaagata gagaggaaat tattgttgga agcattggta tcggagtgag cagaaatgtc 480 tcccctgagc gcaaattgaa acgtagacac cgatcaaagc ctttcattcg gaaaatcgtc 540 cacttaacga aaaatcattt tggaggatgt cctgagtcta gcaaatcgaa tgtcatggca 600 gtgagtaagt ttgtgtatga cttgtgtaag cagcataatt gccttccgca tcaaacgaga 660 atgatcatca gcgttgcagt tccattggtg ttgagtcccg acatgtatga tatatctagt 720 agagctctat tgaacagcga gactcttaac gagaatagag ctaaactgga tcgcctcaaa 780 acgttggatg gatggctctc caatcttata tgccatccac tgagcgctaa ggcttggagg 840 cggacaattg acaatctatg tggtcttcct gattggaagg cctttaggtt gatcaactag 900 gggtgcctag aggagctcgc tgggttttgc acatctgtgc acagagggac acacccagac 960 atgaccgagt atcctcagga acgtcccgtt aagacacgta aactgttttg tttaggggga 1020 gtaggaacga gcgtgcagtt caatgtgcat aacaactcaa tgagaaatct tagaagaggt 1080 ctcatggaac gcgtatttta cgttgaaaat gagaagaaag agttggaacc tgcccctaaa 1140 ccccttgacg gtgtgtttgg taacctagct tggtttcgtc ggaaacttca taatattgtt 1200 ggtactcatt ccagtatatc gccgggtcaa ttcctggatt tttacactgg caggaggcga 1260 accatatatg agggagccgt gaagtccttg gaagggctag gggtccaacg tagagatgca 1320 tatcttaaga catttgttaa agctgaaaag attaacacca caaggaaacc ggacccggct 1380 ccccgggtta tacaacctag gaatgttcgt tacaacgttg aggttggtcg attcttgaga 1440 aggtttgagc attatctcta taggggaatt gatgaaattt ggaatggtcc tactgtgatt 1500 aaaggatata ctgttgagca aatcgggaaa atcgcccgcg atgcttggga ttcattcgtg 1560 agtcccgtgg caatcgggtt tgacatgaag cgatttgacc aacatgtatc catacctgct 1620 ctccaatggg aacacagcgt atatcttgat gcgttctgtc aggacagtta tctcgcagag 1680 ttattgtctt ggcagctcga gaataaggga gtgggctacg ctagtgatgg gatgataaga 1740 tataaggttg atggttgtcg tatgagtggc gacatgaata ccgctatggg taattgtcta 1800 atagcttgcg ctatcacgca tgactttttc cgtcgtcggg gtatgcgggc tcgtctgctt 1860 aataatggtg atgactgcgt cgtgatcgtc gagaaggaat gtgccgcaga ggttaaatct 1920 ggcatggtaa ggcactggcg acagttcggg ttccaatgcg agcttgaatg cgatgctgac 1980 atcttcgagc aaattgaatt ttgtcagatg agacccgtgt acgatgggga aaaatacgtc 2040 atggtgcgca acccgctaat tagcttgtcc aaagatgcgt actctgtcgg cccttggaat 2100 agcattaacc acgcacgcaa atgggtcaac gctgttggcc tgtgtggcat gtccctgact 2160 ggtggtatac ctgttgtcca aagctattat aatatgttta tccgtaatac caaaactgtc 2220 aatagttcca gcatccttcg tgatgtaagc tttgccagtg ggtttaggga attagcaagg 2280 ttgggaaaca ggtcatatag gaacatatct gaggagtcac gatttagctt ttatctcgca 2340 tttggcatta ctcctgactt gcaacgtgcc atggaaagtg actatgatgc tcataccatc 2400 gattggggct ttgtgcccca gggaaatccc agaatacaac caatctcatg gactctcaac 2460 gcactgtaga acaacaaaat cctaggggca gaagtcgtga tcgagatgac ggcgggggaa 2520 aacaaaagaa ttcaatgggg cgaaagatag ccaatgacgc tatcacggaa tcgaagcagg 2580 gagtcatggg cgctagtgtc tacatagcag ataaaattaa agtcaatatt agcttcaatt 2640 tctaagctat gggatgctat cgttgtgact ctggccccgg ggattactct ggtccactgc 2700 ttatactctt ccttgcattc gtcttctttt atattacctc gcttggcccg cacggtaata 2760 catacgttca tctttccgat aactcttctg tcaagaccca atacgttggc atctctacaa 2820 atggcaatga ttaaacgcgt caataagctt cccactgtcc agatggcaaa gcagcttctt 2880 ccgctggtgc catctgctaa actcgtgaat aacgctatag atgtggttcc actggttgtc 2940 caaggtggta agaagttatc taaagccgcc aagcgcttgc ttggcaggta tggaggtaac 3000 attacttaca ctgagggtgc gaaacctggg tccgtttccg ctcccgttgc tattagtcag 3060 cgggttgccg gtatgaagcc caggtttacc caaacagctg gatctgtgaa gatagtgcat 3120 agggaattga ttaccactat cttgcctgct gatagtctca ctgttaacaa tggtgacact 3180 aacactggta agtatagagt gaatccctct aataatgctt tattcacctg gttacaggga 3240 caagcccaac tgtatgatat gtatagattc actaagttgc gatttacata cattccgact 3300 accaacacga ctgcgacagg ccgcgtatct gtcatttggg ataaggattc gcaagacccc 3360 ttgccccaag atagagccgc tattagcagt tatgctcact acgctgactc agccccttgg 3420 gctgaaaatt atttggtggt cccatgcgat aatgtttgga ggtatatgaa tgacactaat 3480 gctgtggatc gcaagttggt tgattttggt caactgattt tcgctactta ctctagtgtc 3540 agttctgtcc cccatggtga tctgtacgtt gaatacactg ttgaattcaa agaaccccaa 3600 cccatttcag gcatgacgtg catgtttgac cgtgacgtgt ctcttggtcc tgtcggatcg 3660 actattagag gatcaaatta cattagcgac accaacgttg tcacctctgg tggtaacgta 3720 ggagtattcc tgaacgtccc gggcacttat ttggttactc ttgttataaa tgccgtgact 3780 gttggtggtt taactttccc tggcaatggc aaacttatcg gctcatctct caatgttaca 3840 ggtggtggcg ccacttctct ttcatttacg gttgcaagta cgggtgttcc taacgcttca 3900 gctgcaactt ttaatgttgg gtctgtggtc acgccgactc gagttcgttt gactatatca 3960 aggtcatcac ctgaaactgc ctatttagct tagaatactt ccacttttaa ggacccttcc 4020 tttagatcgt gttctctgga actgcatctg cttttagttc ttgactcttc tcaaattgtg 4080 tagaatggac tggctaacca ttacggcgta taagagagaa gggtgtgata gactaagggt 4140 gcacgaggcg ccagaagatc gatctggagt ggggttaacg ccatctgcaa atacactctg 4200 tgtggggcgg cagatggata gtcatgttac gattgaggag acttatcggg tctccccgcc 4260 c 4261 //