ID AB232925; SV 1; linear; genomic RNA; STD; VRL; 4261 BP. XX AC AB232925; XX DT 19-MAR-2008 (Rel. 95, Created) DT 17-MAY-2011 (Rel. 108, Last updated, Version 4) XX DE Melon necrotic spot virus genomic RNA, complete genome, isolate: Tottori. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4261 RA Ohki T., Sako I., Takeuchi S., Tsuda S., Honda Y.; RT ; RL Submitted (25-AUG-2005) to the INSDC. RL Contact:Takehiro Ohki National agricultural research center, Department of RL Plant Pathology; Kan-nondai, Tsukuba, Ibaraki 305-8666, Japan XX RN [2] RA Ohki T., Sako I., Kanda A., Mochizuki T., Honda Y., Tsuda S.; RT "A New Strain of Melon necrotic spot virus that Is Unable to Systemically RT Infect Cucumis melo"; RL Phytopathology 11:1165-1170(2008). XX DR MD5; 5913cd214d8ecaf0fc36f64b32bb422e. XX FH Key Location/Qualifiers FH FT source 1..4261 FT /organism="Melon necrotic spot virus" FT /isolate="Tottori" FT /mol_type="genomic RNA" FT /isolation_source="watermelon" FT /note="Melon necrotic spot virus watermelon strain Tottori FT isolate" FT /db_xref="taxon:11987" FT CDS 94..2469 FT /codon_start=1 FT /transl_table=1 FT /transl_except=(pos:898..900,aa:OTHER) FT /gene="p89" FT /product="89K protein" FT /note="Putative RNA-dependent RNA polymerase produced by a FT readthrouth of the amber codon; replicase" FT /db_xref="GOA:B1B1S7" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B1B1S7" FT /protein_id="BAG13029.1" FT /translation="METGLKFLVSGGLATSSVFRKVNAESLLDSSRASSDIIATVHGSM FT INAVRDDCAKVAKVALCVGVAYAVWKAGSLWVRRRPVLRNAIVRGGEEVMEHITVGIDE FT DEDSDAEDREEIIVGSIGIGVSRNVSPERKLKRRHRSKPFIRKIVHLTKNHFGGCPESS FT KSNVMAVSKFVYDLCKQHNCLPHQTRMIISVTVPLVLSPDMYDISSRALLNSETLNENR FT AKLDRLKTLDGWLSNLICHPLSAKAWRRTIDNLCGLPDWKAFRLINXGCLEELAGFCTS FT VHRGTHPDMTEYPQERPVKTRKLFCLGGVGTSVQFNVHNNSMRNLRRGLMERVFYVENE FT KKELEPAPKPLDGVFGNLAWFRRKLHNIVGTHSCVSPGQFLDFYTGRRRTIYEGAVKSL FT EGLGVQRRDAYLKTFVKAEKINTTRKPDPAPRVIQPRNVRYNVEVGRFLRRFEHYLYRG FT IDEIWNGPTVIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSIPALQWEHSVY FT LDAFCQDSYLAELLSWQLENKGVGYASDGMIRYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRCRGIRARLLNNGDDCVVIVEKECAAEVKSGMVRHWRQFGFQCELECDADIFEQIE FT FCQMRPVYDGEKYIMVRNPLISLSKDAYSVGPWNSINHARKWVNAVGLCGMSLTGGIPV FT VQSYYNMFIRNTKTVNSSSILRDVSFASGFRELAKLGNRSYRNISEESRFSFYLAFGIT FT PDLQRAMESDYDAHTIDWGFVPQGNPRIQPISWTLNAL" FT CDS 94..900 FT /codon_start=1 FT /transl_table=1 FT /gene="p29" FT /product="29K protein" FT /db_xref="UniProtKB/TrEMBL:B1B1S8" FT /protein_id="BAG13030.1" FT /translation="METGLKFLVSGGLATSSVFRKVNAESLLDSSRASSDIIATVHGSM FT INAVRDDCAKVAKVALCVGVAYAVWKAGSLWVRRRPVLRNAIVRGGEEVMEHITVGIDE FT DEDSDAEDREEIIVGSIGIGVSRNVSPERKLKRRHRSKPFIRKIVHLTKNHFGGCPESS FT KSNVMAVSKFVYDLCKQHNCLPHQTRMIISVTVPLVLSPDMYDISSRALLNSETLNENR FT AKLDRLKTLDGWLSNLICHPLSAKAWRRTIDNLCGLPDWKAFRLIN" FT CDS 2448..2645 FT /codon_start=1 FT /transl_table=1 FT /gene="p7A" FT /product="p7A protein" FT /db_xref="GOA:B1B1T0" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:B1B1T0" FT /protein_id="BAG13032.1" FT /translation="MDPQRTVEQQNPRGRSRDRDDSGGKQKNSMGRKIANDAITESKQG FT VMGASVYIADKIKVNINFNF" FT CDS 2649..2834 FT /codon_start=1 FT /transl_table=1 FT /gene="p7B" FT /product="p7B protein" FT /db_xref="GOA:B1B1T1" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:B1B1T1" FT /protein_id="BAG13033.1" FT /translation="MGCYRCDSGPGDYSGPLLILFLAFVFFYITSLGPHGNTYVHHFDN FT SSVKTQYVGISTNGND" FT CDS 2821..3993 FT /codon_start=1 FT /transl_table=1 FT /gene="p42" FT /product="capsid protein" FT /db_xref="GOA:B1B1T2" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B1B1T2" FT /protein_id="BAG13034.1" FT /translation="MAMIKRVNKLPTVQMAKQLLPLVPSAKLVNNAIDVVPLVVQGGKK FT LSKAAKRLLGRYGGNITYTEGAKPGSVSAPVAISQRVAGMKPRFTQTAGSVKIVHRELI FT TTVLPADSLTVNNGDTNTGKYRVNPSNNALFTWLQGQAQLYDMYRFTKLRFTYIPTTNT FT TATGRVSVIWDKDSQDPLPQDRAAISSYAHYADSAPWAENYLVVPCDNVWRYMNDTNAV FT DRKLVDVGQLIFATYSSVSSVPHGDLYVEYTVEFKEPQPISGMTCMFDRDVSLGPVGST FT IRGSNYISDTNVVTSGGNVGVFLNVPGTYLVTLVINAVTVGGLTFPGNGRLIGSSLNVT FT GGGATSLSFTVASTGVPNASAATFNVGSVVTPTRVRLTISRSSPETAYLA" XX SQ Sequence 4261 BP; 1099 A; 892 C; 1068 G; 1202 T; 0 other; cggaaatctc tagccgattc cccgtgctct gtgcccgtcc tggcaagtct ttcaagatat 60 tggcgaggtt aaccgtaata acgtaggcta gcaatggaaa ctggattgaa atttctcgtc 120 tctggaggtt tagccacctc ttctgttttt cgcaaggtaa atgcagagag tttattggat 180 tcgtcccgtg cttcatctga cattatagcc actgtgcatg gatcaatgat taatgccgtt 240 cgtgacgatt gtgctaaagt ggccaaggtt gctctgtgtg ttggtgtggc ttacgcagtc 300 tggaaagctg gatccctttg ggttcgtcgt cgaccagtcc tacggaacgc catagtgcgt 360 ggtggagaag aagtcatgga gcatatcact gttggtattg atgaagatga agatagtgat 420 gctgaagata gagaggaaat tattgttgga agcattggta tcggggtgag cagaaatgta 480 tcccctgagc gcaaattgaa acgtagacac cgatctaagc ctttcattcg gaaaatcgtc 540 cacttaacga aaaatcattt tggaggatgt cctgaatcta gcaaatcgaa tgtcatggct 600 gtgagtaagt ttgtgtatga cttgtgtaag cagcataatt gccttccgca tcaaacgaga 660 atgatcatca gcgttacagt tccattggtg ttgagtcccg acatgtatga tatatccagt 720 agagctctat tgaacagcga gactcttaac gagaatagag ctaaactgga tcgcctcaaa 780 acgttggatg gatggctctc caatcttata tgccatccac taagcgctaa ggcgtggagg 840 cggacaattg acaatctatg cggtcttcct gattggaagg cctttaggtt gatcaactag 900 gggtgcctag aggaactcgc tgggttttgc acgtctgtgc atagagggac acacccagac 960 atgaccgagt atcctcagga acgtcccgtt aagacacgca aactgttttg tttaggggga 1020 gtaggaacaa gcgtgcagtt caatgtgcat aacaactcaa tgagaaatct tagaagaggt 1080 ctcatggaac gcgtatttta cgttgaaaat gagaagaaag agttggaacc tgcccctaaa 1140 ccccttgatg gtgtgtttgg taacctagct tggtttcgcc ggaaacttca taatattgtt 1200 ggcactcatt cctgtgtatc gccgggtcag ttcctggatt tttacactgg caggagacga 1260 accatatatg agggagccgt gaagtccttg gaagggctag gggtccaacg tagagatgca 1320 tatcttaaaa cgtttgtcaa agccgaaaag attaacacca caaggaaacc ggacccggct 1380 ccccgggtta tacaacctag gaatgttcgt tataatgttg aggttggtcg attcttgaga 1440 aggtttgagc attatctcta caggggaatt gatgaaattt ggaatggtcc tactgtgatt 1500 aaaggatata ctgttgagca aatcgggaaa atcgcccgtg atgcttggga ttcgttcgtg 1560 agtcccgtgg caatcgggtt tgacatgaag cgatttgacc aacatgtatc catacccgct 1620 ctccaatggg aacacagcgt atatcttgat gcgttctgtc aggatagtta tctcgcagag 1680 ttattatctt ggcagctcga gaataaggga gtgggctacg ctagtgatgg gatgataaga 1740 tacaaggttg atggttgtcg tatgagtggc gacatgaata ccgctatggg taattgccta 1800 atagcctgcg ctatcacgca tgactttttc cgttgtcggg gtatacgggc tcgtctgctt 1860 aataatggtg atgattgcgt cgtgatcgtc gagaaggaat gtgccgcaga ggttaaatct 1920 ggcatggtaa ggcactggcg acagttcggg ttccaatgtg agcttgaatg cgatgcagac 1980 atcttcgagc aaattgaatt ttgtcagatg agacccgtgt acgatgggga aaaatacatc 2040 atggtgcgca acccgctgat tagcttgtcc aaagatgcgt actctgtcgg cccttggaat 2100 agcattaacc acgcacgcaa atgggtcaac gctgttggcc tgtgtggcat gtccctaact 2160 ggtggtatac ctgttgtcca aagctattat aatatgttta tccgtaatac caaaactgtc 2220 aatagctcta gcatcctccg tgatgtaagc tttgccagtg ggtttaggga attagctaag 2280 ctgggaaaca ggtcatatag gaacatatct gaggagtctc gatttagctt ttatctcgca 2340 tttggcatta ctcctgactt gcaacgtgcc atggaaagtg actatgatgc tcataccatc 2400 gattggggct ttgtgcccca gggaaatccc agaatacagc caatctcatg gaccctcaac 2460 gcactgtaga acaacaaaat cctaggggca gaagtcgtga tcgtgatgac agcgggggaa 2520 aacaaaagaa ttcaatgggg cgaaagatag ccaatgacgc tatcacggaa tcgaagcagg 2580 gagtcatggg cgctagtgtc tacatagcgg ataaaatcaa agtcaatatt aactttaatt 2640 tctaagctat gggatgctat cgttgtgact ctggccccgg ggattactca ggtccactgc 2700 ttatactctt ccttgcattc gtcttctttt atattacctc gcttggcccg cacggtaata 2760 catacgttca tcatttcgat aactcttctg tcaaaactca atacgttggc atctctacaa 2820 atggcaatga ttaaacgcgt caacaagctt cccactgtcc agatggcaaa gcagcttctt 2880 ccgctggtgc catctgctaa actcgtgaat aacgctatag atgtggttcc actggttgtc 2940 caaggtggta agaagttatc taaagccgcc aagcgcttgc ttggcagata tggaggtaac 3000 attacttaca ctgagggtgc gaaacctggg tccgtttctg ctcccgttgc tattagtcag 3060 cgggttgccg gaatgaagcc caggtttacc caaacagctg gatctgtgaa gatagtgcat 3120 agggaattga ttaccaccgt tttacctgct gatagtctca ctgttaataa cggtgacact 3180 aacactggta agtatagagt gaatccctct aataatgctt tattcacctg gttacaggga 3240 caagcacaac tgtatgatat gtatagattc actaagctgc gatttacata tattccgact 3300 accaacacga ctgcgacagg ccgcgtttct gtcatttggg ataaggattc gcaagaccca 3360 ttgccccaag atagagccgc tattagcagt tatgctcact acgctgactc agccccttgg 3420 gctgagaatt atttggtggt cccatgcgat aatgtttgga ggtatatgaa tgacactaat 3480 gctgtggatc gcaagttggt tgatgttggt caactgattt ttgctactta ctccagtgtc 3540 agttctgtcc cccatggtga tctgtatgtt gaatatactg ttgaattcaa agaaccccaa 3600 cccatttcag gcatgacgtg catgtttgac cgtgacgtgt ctcttggtcc tgtcggttcg 3660 actattagag gatcaaatta cattagtgac accaacgttg tcacctctgg tggtaacgtt 3720 ggagtattct tgaacgtccc gggaacttat ttggttactc ttgttataaa tgccgtgact 3780 gttggtggtt taactttccc tggcaatggc agacttattg gctcatctct caatgttaca 3840 ggtggtggcg ccacttctct ttcatttacg gttgcaagta cgggtgttcc taacgcttca 3900 gctgcaactt ttaatgttgg gtctgtggtc acgccaactc gagttcgttt gactatatcc 3960 aggtcatcac ctgaaactgc ctatttagct tagaatactt ccaaatttat ggatccttca 4020 tctagatcgt gttctctgga actgcatctg cttttagttc ttgactcttc tcaaattgtg 4080 tagaatggac tggctaacca ttacggcgta taagagagaa gggaatgatt gactaagggt 4140 gcacgaggcg tcagaagatc gaactggagt ggggttaacg ccatctgcaa atacactctg 4200 tgtggggcgg cagatggata gtcatgttac gattgaggag acttatcggg tctccccgcc 4260 c 4261 //