ID AB196000; SV 1; linear; genomic RNA; STD; VRL; 6435 BP. XX AC AB196000; XX DT 26-JUL-2010 (Rel. 105, Created) DT 26-JUL-2010 (Rel. 105, Last updated, Version 1) XX DE Potato virus X genomic RNA, complete genome, strain: OG. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6435 RA Namba S., Komatsu K., Oshima K., Yamaji Y.; RT ; RL Submitted (02-DEC-2004) to the INSDC. RL Contact:Shigetou Namba The University of Tokyo, Graduate School of RL Agricultural and Life Sciences, Department of Agricultural and RL Environmental Biology, Laboratory of Plant Pathology; 1-1-1 Yayoi, RL Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; 10.1007/s11262-005-2205-z. RX PUBMED; 15965614. RA Komatsu K., Kagiwada S., Takahashi S., Mori T., Yamaji Y., Hirata H., RA Ozeki J., Yoshida A., Suzuki M., Ugaki M., Namba S.; RT "Phylogenetic characteristics, genomic heterogeneity and symptomatic RT variation of five closely related Japanese strains of Potato virus X"; RL Virus Genes 31(1):99-105(2005). XX DR MD5; 9838903186278a6ebfe3a87438fced75. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX FH Key Location/Qualifiers FH FT source 1..6435 FT /organism="Potato virus X" FT /strain="OG" FT /mol_type="genomic RNA" FT /country="Japan:Gunma" FT /db_xref="taxon:12183" FT CDS 85..4455 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:E1CAI1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E1CAI1" FT /protein_id="BAJ12046.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLANPHAQTV FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSILPQEPVTFMFLKPRKLNYM FT RRNPRIKAIFHNVAIEPRDVARYPKETIIDKLTEITTDTAYISNTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFAHLQ FT WLKVGKIKWRDPKDSFLGHLNYTTEQVEMHTVTVQLQESFAANHLYCIRRGDLLTPEVR FT TFGQPDRYVIPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKYSAVELVYLVSYMEFLADLQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLFG FT LEDYAKLVKAVDFHPVDFSFKVETWDFRFHPLQAWKAFRPREVSDVEEMESLFSDGDLL FT DCFTRMPAYAVNAEEDLAAIRKAPEMDVGQEVKEPAGDRNQYSNPAETFLNKLHRKHSR FT EVKHQAVKKAKRLAEIQESMRAEGEAESNEMSGGMGAIPSNAELPSTSDARQELTLPTT FT IPVPARWEDASFTDSSVEEEQVKLPGKEAVETATQQVIEGLPWKHWIPQLNAVGFKALE FT IQRDRSGTMIMPITEMVSGLEKEDFPEGTPKELARELLAMNRSPATIPLDLLRARDYGS FT DVKNKRIGAITKTQAASWGEYLTGKIESLTERKVATCVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALICFYSKIKLVILTGDSRQSVYHETAEDASIRHLGPATEYFSKYCRYYLNATHRNKKD FT LANMLGVYSERTGVTEISMSAEFLEGIPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFVNTSANSSAFWEKLDSTPYLKTFLSVV FT REQALREYEPAEAEPIREPEPQTHMCVENEESVLEEYKEELLEKFDREIHSESHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQETNFREFLSKKDIGDVLFLNYQKA FT MGLPKERIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWALNNWNFSRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDIPAGTAQVYAGDDSALDCVPEVKHSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELKKC FT QDSYEIDLSYAYDHKDSLHDLFNEKQCQAHTLTCRTLIKSGRGTVSLPRLRNFL" FT CDS 4486..5166 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp1" FT /product="Triple gene block protein 1" FT /db_xref="GOA:E1CAI2" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:E1CAI2" FT /protein_id="BAJ12047.1" FT /translation="MDILIISLKSLGYSRTYKSLDSGPLVVHAVAGAGKSTALRKLILR FT HPTFTVHTLGVPDKVSIRTRGIQKPGPIPEGNFAILDEYTLDNTTRNSYQALFADPYQA FT PEFSLEPHFYLETSFRVPRKVADLIAGCGFDFETNSQEEGHLEITGIFKGPLLGKVIAI FT DEESETTLSRHGVEFVKPCQVTGLEFRVVTIVSAAPIEEIGQSTAFYNAITRSKGLTYV FT RAGT" FT CDS 5147..5494 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp2" FT /product="Triple gene block protein 2" FT /db_xref="GOA:B7U9M5" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:B7U9M5" FT /protein_id="BAJ12048.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALVSITFLLSRNSLPHVGDN FT IHSLPHGGAYRDGTKAILYNSPNLGSRVSLHNGKNAAFAAVLLLTLLIYGSKHISQRNH FT TCACGNNHSSH" FT CDS 5427..5639 FT /codon_start=1 FT /transl_table=1 FT /gene="TGBp3" FT /product="Triple gene block protein 3" FT /db_xref="GOA:E1CAI4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:E1CAI4" FT /protein_id="BAJ12049.1" FT /translation="MEVSTYLNAIILVLVVTIIAVISTSLVRTEPCVIKITGESITVLA FT CKLDAETIRAIADLKPLSVERLSFH" FT CDS 5650..6363 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q77LU0" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q77LU0" FT /protein_id="BAJ12050.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 6435 BP; 1980 A; 1512 C; 1471 G; 1472 T; 0 other; gaaaactaaa ccatacacca ccaacacaac caaacccacc acgcccaatt gttacacacc 60 cgcttggaaa agcaagtcta acaaatggcc aaagtgcgcg aggtttacca atcctttaca 120 gactccacca caaaaactct catccaagat gaggcttata gaaatattcg tcccatcatg 180 gaaaaacaca aactagctaa cccgcacgct caaacggttg aagcagctaa tgatctagag 240 gggttcggca tagctaccaa tccctatagc attgaattgc atacacatgc agccgctaag 300 accatagaga ataaacttct agaggtgctt ggttccatcc taccacaaga acctgttaca 360 tttatgttcc tcaaacccag aaagctaaac tacatgagaa gaaacccgag gattaaggcc 420 attttccaca atgttgccat tgaaccgaga gacgtagcaa ggtaccccaa ggaaacaata 480 attgacaaac ttacagagat cacaacggat acagcataca ttagtaacac tctgcacttc 540 ttggatccga gctacatagt ggagacattc caaaactgcc caaaattgca aacattgtat 600 gcgaccttag ttctccccgt tgaggcagcc ttcaaaatgg agagcactca cccgaacata 660 tacagcctca aatacttcgg ggatggtttc cagtatatac caggcaacca tggtggtgga 720 gcataccatc atgaattcgc tcatttacaa tggctcaaag tgggaaagat taagtggagg 780 gaccccaagg atagctttct cggacatctc aactacacga ctgagcaggt tgagatgcac 840 acagtgacag tacagttaca ggaatcattc gcggcgaacc acttgtactg catcaggaga 900 ggagacttgc ttacaccgga ggtgcgcact tttggccaac ctgacaggta tgtgatccca 960 ccacagattt ttctcccaaa agtccacaac tgcaagaagc cgattcttaa gaaaactatg 1020 atgcagctct tcttgtatgt tagaacagtc aaggtcgcaa aaaattgtga catttttgcc 1080 aaagtcagac aattaatcaa atcatctgac ttggacaaat actctgctgt ggaactagtt 1140 tacttagtaa gctatatgga gttccttgcc gatttacaag ctaccacctg cttctcagac 1200 acactttctg gtggcttact aacaaagacc cttgcaccgg tgagggcttg gatacaagag 1260 aaaaagatgc aactgtttgg ccttgaggac tacgcgaaat tagtcaaagc agttgatttc 1320 cacccggtag atttttcttt taaagtggaa acttgggact ttagattcca ccccctgcaa 1380 gcgtggaaag ccttccgacc aagggaagtg tcggatgtgg aggaaatgga aagtttgttc 1440 tcagatgggg acctgcttga ttgcttcacc agaatgccag cttatgcagt aaacgcagag 1500 gaagatttag ctgcaatcag gaaagcgcct gagatggatg tcggccaaga agttaaggaa 1560 cctgcaggag acagaaatca atactcgaac cctgcagaaa ctttcctcaa caagctccac 1620 aggaaacaca gtagggaggt gaaacatcag gccgtaaaga aagctaaacg cttagctgag 1680 atccaggagt ccatgagagc tgaaggcgag gccgaatcaa atgaaatgag cgggggtatg 1740 ggggcaatac ctagcaacgc cgaacttccc agcacgagtg atgccagaca agagctcaca 1800 ctcccaacca ctatacctgt tcctgcaagg tgggaagatg cttcattcac agattctagt 1860 gtggaagagg agcaagtgaa actccctgga aaagaagccg ttgagacagc aacgcaacaa 1920 gtcattgaag gactcccttg gaagcactgg attcctcaac taaatgctgt tggattcaag 1980 gcgctggaaa ttcagaggga taggagtgga acaatgatca tgcccatcac agaaatggtc 2040 tccgggttgg aaaaagagga cttcccggaa ggaactccaa aagaattggc acgagaattg 2100 ctcgctatga acagaagccc tgccaccatc cctttagacc tgcttagagc cagagactac 2160 ggcagtgatg tgaagaacaa gagaattggt gccatcacaa agacacaagc cgcaagttgg 2220 ggcgagtacc taacaggaaa gatagagagc ctgaccgaga ggaaagttgc gacttgtgtc 2280 attcatggag ctggaggctc tgggaaaagt catgccatcc agaaggcatt gagagaaatt 2340 ggcaagggat cggacatcac tgtagtcctg ccgaccaatg aactgcgact agattggagt 2400 aagaaagtgc ccaacactga accatatatg ttcaagacct atgaaaaggc gttgattggg 2460 ggaacaggca gtatagtcat ctttgacgat tactcaaaac ttcctcccgg ttacatagaa 2520 gccttaatct gtttctactc taaaatcaaa ctagtcattc taacaggaga tagcagacag 2580 agcgtctacc atgaaactgc tgaggacgcc tccatcaggc atttgggacc agcgacagag 2640 tacttctcaa aatactgccg atactatctc aatgctacac accgcaacaa gaaagacctt 2700 gcgaacatgc ttggtgtcta cagtgagaga acgggagtca ccgaaatcag catgagcgct 2760 gagttcctag aagggatccc aactttggtg ccctcggatg aaaagagaag actgtacatg 2820 ggcaccggga ggaatgacac gttcacatat gccggatgcc agggactaac taagccgaaa 2880 gtacaaatag tgctggacca caacacccaa gtgtgcagcg cgaatgtgat gtacacggca 2940 ctctctagag ccaccgacag gattcacttt gtgaacacaa gtgcaaactc ttcggccttc 3000 tgggaaaagt tggacagcac cccctatctc aagactttcc tatcagtagt gagagaacaa 3060 gcactcaggg agtacgagcc ggcagaggca gagccaattc gagagcctga gccccagaca 3120 cacatgtgtg tcgagaatga ggagtccgtg ctagaagagt acaaagagga actcttggaa 3180 aagtttgaca gagagatcca ttctgaatcc catggtcatt caaactgtgt ccagacggaa 3240 gacacaacca ttcagctgtt ttcgcatcaa caggcaaaag atgagaccct cctttgggcg 3300 actatagatg cgcggctcaa gaccagcaat caagagacaa acttccgaga attcttgagc 3360 aagaaagaca ttggggatgt tctgtttttg aactaccaaa aagctatggg tttgcccaaa 3420 gagcgtattc ctttctcaca agaggtctgg gaagcttgtg cccacgaagt gcaaagcaag 3480 tacctcagta agtcaaagtg caacttgatc aatgggactg tgagacagag cccagacttt 3540 gatgaaaaca aaattatggt attcctcaag tcgcagtggg tcacaaaggt ggaaaagcta 3600 ggtctaccca agattaagcc aggtcaaact atagcagctt tttatcagca gactgtgatg 3660 ctctttggaa ctatggctag gtacatgcga tggttcagac aggctttcca gccaaaagaa 3720 gtcttcataa actgtgagac cacgccagaa gacatgtctg catgggcctt gaacaactgg 3780 aattttagca gacctagctt ggctaatgat tacacagctt tcgaccagtc tcaggacgga 3840 gctatgctgc aatttgaggt gctcaaagct aagcaccact gcataccaga ggaaatcatc 3900 caagcataca tagacattaa gaccaatgca cagattttcc taggcacatt atcaattatg 3960 cgcctgactg gtgaaggccc cacttttgat gcaaacactg agtgcaacat agcttacaca 4020 catacaaagt ttgacatccc agccggaact gctcaagttt atgcaggaga cgactctgca 4080 ctggattgcg ttccagaagt gaaacatagt ttccacaggc ttgaagataa attgctcctc 4140 aagtcaaagc cagtaatcac gcaacaaaag aaaggcagtt ggcctgagtt ttgtggttgg 4200 ctgattacac caaaaggggt gatgaaagat ccaattaagc tccatgttag cttaaaattg 4260 gccgaagcta agggtgaact caagaaatgt caagattctt atgaaattga tctgagttat 4320 gcctatgacc acaaggactc tctgcatgac ctattcaatg agaaacagtg tcaggcacat 4380 acactcactt gcaggacatt aatcaagtca gggagaggca ctgtctcact tccccgcctc 4440 agaaactttc tttaaccgtt aagttacctt agagatttga ataagatgga tattctcatc 4500 attagtttga aaagtttagg ttattctagg acttataaat ctttagattc aggacctttg 4560 gtagtacatg cagtagccgg agccggtaag tccacagccc taaggaagtt gatcctcaga 4620 caccctacat tcaccgtgca tacactcggt gtccctgaca aggtgagtat cagaactaga 4680 ggtatacaga agccaggacc tattcctgag ggcaatttcg caatccttga tgagtatact 4740 ttggacaaca ccacaaggaa ctcataccag gcactttttg ccgaccccta tcaggcacct 4800 gagtttagcc tagagcccca cttctacttg gagacatcat ttcgagttcc gaggaaagtg 4860 gcagatctga tagcaggctg tggtttcgat ttcgagacca attcacaaga agaagggcac 4920 ttagagatca ctggcatatt caaagggccc ctacttggga aggtgatagc cattgacgag 4980 gagtctgaga caacactgtc caggcatggt gttgagtttg ttaagccctg ccaagtgact 5040 ggacttgagt tcagagtagt cactattgtg tctgccgcgc caatagagga aattggccag 5100 tccacagctt tttacaacgc catcaccagg tcaaagggat tgacatatgt ccgcgcaggg 5160 acatagactg actgctccgg tcaattctga aaaagtgtac atagtattag gtctatcatt 5220 tgctttagtt tcaattacct ttctgctttc tagaaatagt ttaccccacg tcggcgacaa 5280 cattcacagc ctgccacacg gaggagctta cagagacggc actaaagcaa tcttgtacaa 5340 ctccccaaat ctagggtcac gagtgagtct acacaacgga aagaacgcag catttgctgc 5400 cgttttgcta ctgactttac tgatctatgg aagtaagcac atatctcaac gcaatcatac 5460 ttgtgcttgt ggtaacaatc atagcagtca ttagtacttc cttagtgagg actgaacctt 5520 gtgtcatcaa gattactgga gaatcaatca cagtgttggc ttgtaaatta gatgcagaaa 5580 ccattagagc cattgccgat ctcaagccac tctccgttga acggttaagt ttccattgat 5640 actcgaaaga tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact 5700 accacaaaaa ctgcaggcgc aactcctgcc acagcttcag gactgttcac tatcccggat 5760 ggggatttct ttagtacagc tcgtgccata gtagccagca atgctgttgc aacaaatgag 5820 gacctcagca aaattgaggc tatttggaag gacatgaagg tgcccacaga cactatggca 5880 caggctgctt gggacttagt cagacactgt gctgatgtag gttcatctgc tcagacagaa 5940 atgatagata caggtcccta ttccaacggt atcagcagag ctagactggc agcagcaatt 6000 aaagaggtgt gcacacttag gcaattttgc atgaagtatg ccccagtagt atggaactgg 6060 atgttaacta acaacagtcc acctgctaac tggcaagcac aaggtttcaa gccggagcac 6120 aaattcgctg cattcgactt cttcaatgga gtcactaacc cagctgccat catgcccaaa 6180 gaggggctta tccggccacc gtctgaagct gaaatgaatg ctgcccaaac tgctgccttt 6240 gtgaagatta cgaaggccag ggcacaatcc aacgactttg ccagcctaga tgcagctgtc 6300 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct accaccacca 6360 taactacgtc tacataaccg acgcctaccc cagtttcata gtattttctg gtttgattgt 6420 atgaataata taaat 6435 //