ID   AB194638; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB194638;
XX
DT   07-JAN-2006 (Rel. 86, Created)
DT   08-DEC-2011 (Rel. 111, Last updated, Version 4)
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DE   Leek yellow stripe virus gene for coat protein, partial cds, isolate:
DE   Saga.Kikai#1.
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KW   .
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OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-864
RA   Sano T.;
RT   ;
RL   Submitted (08-NOV-2004) to the INSDC.
RL   Contact:Teruo Sano Hirosaki University, Faculty of Agriculture and Life
RL   Science; Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan URL   
RL   :http://nature.cc.hirosaki-u.ac.jp/lab/3/plapath/
XX
RN   [2]
RX   DOI; 10.1007/s00705-004-0482-9.
RX   PUBMED; 15703850.
RA   Takaki F., Sano T., Yamashita K., Fujita T., Ueda K., Kato T.;
RT   "Complete nucleotide sequences of attenuated and severe isolates of Leek
RT   yellow stripe virus from garlic in northern Japan: identification of three
RT   distinct virus types in garlic and leek world-wide";
RL   Arch. Virol. 150(6):1135-1149(2005).
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DR   MD5; babbb6f1eab50e4eea946fe687b2a9ec.
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FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium sativum"
FT                   /isolate="Saga.Kikai#1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Saga prefecture"
FT                   /note="synonym: Leek yellow stripe potyvirus"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2PH32"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q2PH32"
FT                   /protein_id="BAE72849.1"
FT                   /translation="AGEEMDAGTQANKNQKSSADKSIEQRNPLTQTSVHGKNDGGSSSD
FT                   LSMGKDRDVNVGTTGTFSVPRIKKISEKGIAIPMDGGKSILNLDHLLQYKPSQICISNT
FT                   RATRAQFITWKARLQDEYGVTASEMSIILNGLMVWCIENGTSPNINGVWTMMDGEEQVE
FT                   FPLRPVVENAQPTLRQIMAHFSTLAEAYIEMRNAEQAYMPRYGLQRNLTDMSLARYAFD
FT                   FYEVTSRTPVRAREAHAQMKAAALRNSRPRLFGLDGNVTTMDEDTERHTAHDVNARMHH
FT                   LDGAHMQ"
XX
SQ   Sequence 864 BP; 290 A; 158 C; 232 G; 184 T; 0 other;
     gcgggtgagg agatggacgc aggaacgcag gcaaacaaga accagaaaag tagcgcggat        60
     aagtcaatag agcagcgaaa tccgttaacc cagactagtg tgcatggaaa gaatgatggt       120
     ggcagtagtt cagacctgag tatgggtaaa gatagagatg tgaatgttgg tacaacagga       180
     acatttagtg taccacggat aaagaaaatc tcggaaaaag gcatagcaat tccaatggat       240
     gggggaaaat cgattcttaa cttagaccac ctcttacagt ataaacctag tcagatatgt       300
     atatcaaaca caagggcaac cagagctcaa ttcataactt ggaaagcaag gctgcaggac       360
     gaatatggtg ttactgcgag tgagatgagt attattttga atggtttgat ggtgtggtgc       420
     attgagaatg gaacttcacc aaacataaat ggggtctgga ctatgatgga tggcgaggaa       480
     caggtcgaat ttcctttgcg accagtggtg gaaaacgcac aaccaacttt gcggcagata       540
     atggcgcatt tctcaacact tgcagaagct tacattgaaa tgaggaatgc ggaacaggca       600
     tacatgccaa gatatggatt acaaaggaat ttaacagaca tgagtctcgc acgatacgca       660
     tttgactttt acgaagtcac atcaagaaca ccagttagag cgcgcgaggc tcatgcacaa       720
     atgaaagcag cagccttgag aaattcaagg ccaaggttgt ttggattgga cggtaacgtc       780
     acaactatgg atgaggacac ggagaggcac acagcacatg acgtgaatgc acggatgcac       840
     catctcgatg gtgcgcatat gcag                                              864
//