ID   AB189848; SV 1; linear; genomic DNA; STD; VRL; 1562 BP.
XX
AC   AB189848;
XX
DT   08-MAR-2005 (Rel. 83, Created)
DT   13-JAN-2009 (Rel. 99, Last updated, Version 4)
XX
DE   Tomato leaf curl Java virus-[Magelang] C1, C4, V1, V2 genes for
DE   replication-associated protein, putative C4 protein, capsid protein,
DE   putative V2 protein, partial and complete cds, clone: ToMag-2.
XX
KW   .
XX
OS   Tomato leaf curl Java virus-[Magelang]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1562
RA   Ikegami M.;
RT   ;
RL   Submitted (05-SEP-2004) to the INSDC.
RL   Contact:Masato Ikegami Tohoku University, Plant Pathology, Departemen of
RL   Life Science; 1-1 Tsutsumidori-Amamiyamachi, Sendai, Miyagi 981-8555, Japan
XX
RN   [2]
RA   Sukamto, Kon T., Hidayat S.H., Ito K., Hase S., Takahashi H., Ikegami M.;
RT   "Begomoviruses Associated with Leaf Curl Disease of Tomato in Java,
RT   Indonesia";
RL   J. Phytopathol. 153:562-566(2005).
XX
DR   MD5; 66ba458c25caba434260791c62ac4bdd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1562
FT                   /organism="Tomato leaf curl Java virus-[Magelang]"
FT                   /host="Lycopersicon esculentum"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia:Magelang, Dukun"
FT                   /clone="ToMag-2"
FT                   /db_xref="taxon:292476"
FT   CDS             complement(<1..767)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:Q5CCZ0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q5CCZ0"
FT                   /protein_id="BAD90865.1"
FT                   /translation="MAPPKRYKIQAKNYFLTYPQCSLTKEEALSQIQALDTPTNKKYIK
FT                   ICRESHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFH
FT                   NLNANLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSDAAARPWRPISIVIEGD
FT                   SRTGKTMWARSLGPRNYLCGHLDLSPKVYSNDA"
FT   CDS             complement(320..610)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C4"
FT                   /product="putative C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q5CCY9"
FT                   /protein_id="BAD90866.1"
FT                   /translation="MGALISTCLSSSKENTSARITDSSTLYPLPGQHISIRTFRELNPA
FT                   PTSSPISTRTETPSNGVSFRSMDDLQEEDNRQPMMLTPRHLTAAVSQRLLM"
FT   CDS             1045..1395
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="V2"
FT                   /product="putative V2 protein"
FT                   /db_xref="GOA:Q5CCY8"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q5CCY8"
FT                   /protein_id="BAD90867.1"
FT                   /translation="MWDPLLNEFPETVHGLRCMLSVKYLQLVEATYSPDTIGYDLVRDL
FT                   ISVIRARNYVEASRRYSHFHSRLEGTSPSELRHTRDEPCCCPHCPRHQQKKDMDQQAHV
FT                   SQAQTVQNVQKP"
FT   CDS             1205..>1562
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="V1"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q5CCY7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q5CCY7"
FT                   /protein_id="BAD90868.1"
FT                   /translation="MSKRPADIVISTPASKVRRRLNFDTPAMSRVAAPTVLVTNKRRTW
FT                   TNRPMYRKPRLYRMYRSPDVPKGCEGPCKVQSFESRHDVSHVGKVCCITDVTRGLGLTH
FT                   RTGKRFCVKSVYIMG"
XX
SQ   Sequence 1562 BP; 422 A; 344 C; 341 G; 455 T; 0 other;
     caagcatcat tactgtacac ctttggactc agatctagat gaccgcacag ataattacgt        60
     ggtcccagtg atctggccca cattgtttta cctgtacgac tatcaccttc tatcacaata       120
     ctgataggtc tccatggccg cgcagcggca tcactcacgt tctcggaaac ccattcttca       180
     agttcttctg gaacttgatc gaaagaagaa gacaaaaaag gacaaacaaa aacctctaaa       240
     ggaggtgcaa aaatcctatc taaattagca tttaaattat gaaattgtaa aacaaaatct       300
     ttaggagcta actccttaat tacattaaga gcctctgact tactgccgct gttaagtgcc       360
     tgggcgtaag catcattggc tgtctgttgt cctcctcttg cagatcgtcc atcgatctga       420
     aactcacccc attcgagggt gtctccgtcc ttgtcgatat aggacttgac gtcggagctg       480
     gatttagctc cctgaatgtt cggatggaaa tgtgctgacc tggaagggga tacaaggtcg       540
     aagaatctgt tattcgtgca gacgtatttt ccttcgaact ggataagcac gtggagatga       600
     gggctcccat cttcgtgcga ttctctgcag atttttatgt attttttatt agttggtgta       660
     tctagggctt gaatttggga aagtgcttct tctttagtaa gagagcactg tggataagtg       720
     aggaaataat ttttggcttg tattttataa cgtttgggag gagccattga cttggtcaat       780
     tggagacatt catagttctc tgtcaattgg agacaggaga caatatatag gtgtctccaa       840
     atggcatagt cgtaatttct catagaaatt caaactttaa tttgaaatcc aaaagcggcc       900
     atccgtataa tattaccgga tggccgcgat ttttttaaag tggtcccctc cactaagaaa       960
     tgtcccccaa tcagaacgcg ccctcaaagc taaattatta actggtcccc tatttatact      1020
     tggtcaccaa gtataatttt aaacatgtgg gatccactct taaacgaatt cccagagact      1080
     gttcacggtc tacggtgtat gctatccgta aaatatcttc aattagttga agctacgtat      1140
     tctcctgata ctattgggta cgatcttgta cgcgatttaa tttcagtaat tcgtgctcgc      1200
     aattatgtcg aagcgtcccg ccgatatagt catttccact cccgcctcga aggtacgtcg      1260
     ccgtctgaac ttcgacacac ccgcgatgag ccgtgttgct gcccccactg tcctcgtcac      1320
     caacaaaaga aggacatgga ccaacaggcc catgtatcgc aagcccagac tgtacagaat      1380
     gtacagaagc cctgatgttc ccaaaggttg tgaaggccca tgtaaggtcc agtcttttga      1440
     gtccaggcat gatgttagtc atgtgggtaa ggtctgttgt ataactgacg tcactagggg      1500
     tttaggtttg acacatagga cgggtaagag gttttgcgtt aagtccgtct acataatggg      1560
     ca                                                                     1562
//