ID   AB188969; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188969;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: Rn98.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; a6c542d78e3edcf1d6fc92292ea7b26a.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Rn98"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689M7"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689M7"
FT                   /protein_id="BAD38788.1"
FT                   /translation="NDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMIFQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKIGREVFGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDETPF
FT                   TDITLIQKHFGDIRMDLLAEDELDPNELRTNRTIQAYYMNNKTGKALKVDLTPHVPFKV
FT                   CDFHATIAGFPEREDELRQTGKAQPISINEIPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELIIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPERGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSHFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWIKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 503 A; 336 C; 353 G; 335 T; 0 other;
     aatgacggga tatctcgtca ctttatgagt gaatacggag cgctcgaagc agttcaccat        60
     cagaacacca acgacatgag caagttcctg aagctcaaag gcaagtggaa caaaacacta       120
     atcacacgag acgtattggt aatctgtgga gttcttgggg gtggaatatg gatgattttc       180
     caacacctgc gatcgaagat ttcagaaccc gtaacccatg aagcaaaggg caagagacaa       240
     agacagaagc tgaagtttcg caacgcccgg gacaataaga tagggagaga ggtcttcgga       300
     gatgatgaca ccatagaaca cttctttggg gatgcctaca caaagaaggg aaagagtaaa       360
     ggcagaacgc gtggtcttgg tcataagaac aggaaattca tcaacatgta tgggtttgat       420
     cctgaggatt tctcagcagt taggtttgtg gacccattga caggagccac attagatgag       480
     actccattca ctgatatcac tcttatacaa aagcattttg gtgacatccg gatggattta       540
     ctcgcagagg acgaactaga cccaaatgag ttgcgcacga atagaacgat ccaggcctac       600
     tacatgaata ataaaacagg caaggcgcta aaggtggacc tcacaccgca cgtaccattc       660
     aaggtatgtg acttccacgc aaccattgct ggatttccgg aaagggaaga cgaactgaga       720
     caaactggaa aagctcagcc aataagcata aacgagatac ctaaggccaa caccgagcta       780
     gttccagttg accacgaaag cagctccatg ttcagagggt tacgtgacta taacccgata       840
     tccaataaca tttgtcacct gacaaatgta tcagacggag catcaaactc gttgtatggt       900
     gttggtttcg gaccactcat actaacaaac cgacatctct ttgaacggaa caatggtgag       960
     ctaattatta aatctcgaca tggcgagttc gtgatcaaga acacgactca gctgcatttg      1020
     ctaccaattc cggatagaga tttattgtta atccgactac cgaaagacat tccacctttc      1080
     ccacagaaat taggatttag acaacctgaa agaggtgaga ggatttgtat ggtaggatct      1140
     aacttccaaa ccaaaagcat cacgagcgtg gtgtctgaga ctagcacgat catgccagtg      1200
     gagaacagtc acttttggaa gcactggatt agcaccaaag atggacaatg tggaagcccg      1260
     atggtgagca cgaaagatgg aaagatacta gggttgcaca gcctagcgaa ttttcagaac      1320
     tccatcaact attttgccgc cttcccagat gattttgcag aaaaatatct ccacaccatc      1380
     gaagcacatg agtggataaa acactggaaa tataacacta gtgcgattag ttggggctcc      1440
     ctaaatatac aagcttcgca accagcgggc ttattcaaag tgagcaaact catatcagac      1500
     ctcgacagca cagcagtgta cgcacaa                                          1527
//