ID   AB188968; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188968;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: PV0054.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 4673df270cc4a5716883b391491844f8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PV0054"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689M8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689M8"
FT                   /protein_id="BAD38787.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNDMSRFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDTKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKGKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMNLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQAAQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 487 A; 345 C; 362 G; 333 T; 0 other;
     actgatggga tatctcggca tttcatgagt gagtatggag ctctcgaggc agttcaccac        60
     caaaacacca acgatatgag cagattcctc aagctcaagg gcaagtggaa caaaacgcta       120
     attacgcgag atgtgttggt gctttgtgga gttctcggag gtggattgtg gatggtcatt       180
     cagcacttgc gatcaaaaat ttctgagccc gtaacccacg aagctaaagg caagaggcag       240
     agacagaaac tgaagtttcg caatgctcga gacaccaaaa tgggtaggga ggtgtatgga       300
     gatgacgaca ccatagaaca cttcttcggg gatgcttaca cgaagaaggg aaagggcaaa       360
     ggcagaacac gcggtatcgg tcacaaaaac aggaaattta tcaacatgta tggatttgat       420
     cctgaagact tctctgcagt tcgctttgta gacccactca caggagcgac actggatgac       480
     aacccactca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatgaactta       540
     ctcggagagg atgagcttga cccaaatgaa atacgtgtga acaagacaat ccaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatt tgacaccaca catgcccctc       660
     aaggtgtgtg accttcatgc aaccattgct ggatttccag agcgagagaa tgaattgagg       720
     cagactggaa aggctcagcc catcaacata gacgaggtgc caagagccaa caacgaactt       780
     gttccagtgg accatgaaag caactccatg ttcagagggt tgcgagacta caacccaatc       840
     tcaaacaaca tttgtcattt aacaaatgtg tcagatggag catcgaattc gttatatgga       900
     gtcggtttcg ggccactcat attaacgaac cgacacctct ttgaacggaa taacggtgag       960
     ctcgtaataa aatcacgaca tggtgagttc gtgatcaaaa acacaactca gctacatttg      1020
     ttaccgattc cggacagaga tcttttgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaac taggtttcag gcaacctgag aagggtgaac gaatttgcat ggtgggatcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtaagca caaaggacgg gaaaatactc gggttacaca gcctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct tcacaccatc      1380
     gaggcacatg aatgggtcaa gcactggaag tataatacta gtgccatcag ttggggctct      1440
     ctgaatatac aagcagcgca accatcaggc ttgttcaaag taagcaagct aatttcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//