ID   AB188966; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188966;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GK1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; a07cc1d936d946059a4218cc6fa12224.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GK1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689N0"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689N0"
FT                   /protein_id="BAD38785.1"
FT                   /translation="TDGISRSFMREYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGVWMILQSLQSGVTEPVTHEAKGKRQRQKLKFRNARDSKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFVNMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDITLVQKHFGDIRTDLLEEDEIEPQALQYHKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIETHEWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDGTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 503 A; 306 C; 349 G; 369 T; 0 other;
     actgatggaa tttctcggag ttttatgcgc gagtatggag cacttgaagc agttcaccac        60
     caaagtacca atgatatgag caagttcctt aaacttaagg gcaagtggaa caaaacacta       120
     atcacaagag atgtgttggt tatttgtgga gttcttggag gtggagtttg gatgattttg       180
     cagagcctgc agtctggagt cactgaaccc gtaacacacg aagcgaaagg taagaggcaa       240
     agacagaaac tgaaattccg caacgctcga gacagcaaaa tgggtagaga agtctatggg       300
     gatgatgaca ctatagaaca cttcttcgga gatgcctaca caaagaaggg aaaaagcaaa       360
     ggtaggacac gtggtattgg ccacaaaaac agaaaattcg tcaatatgta tggatttgat       420
     cctgaagatt tctctgcagt cagatttgta gacccactta caggagcaac attggatgag       480
     agtccgttca cagatatcac tcttgttcag aaacattttg gggacatacg gaccgacttg       540
     cttgaggaag acgaaattga accacaggca ttacaatacc acaaaacaat ccaggcctac       600
     tacacgaata acaaaacggg taaagccttg aaggtggact taacaccaca catacctctc       660
     aaggtgtgtg accttcatgc aaccattgct ggttttccag aacgtgagtt tgaactgagg       720
     caaactggga aagctcaacc cataagcata gatgaagtgc ctaaagccaa taccgagtta       780
     gtccctgttg atcacgaaag tagttccatg ttcagaggat tgcgcgatta caacccaata       840
     tcaaataaca tttgtcatct cacaaatgtt tcagatggtg catcaaactc attgtatgga       900
     gttggttttg gaccactcat attaacgaat cggcatctgt ttgaacggaa caacggagaa       960
     ctcctaataa agtcgcgaca tggcgaattt gtgattagaa acacaacgca actccatctg      1020
     ttaccaattc cagatagaga tttgttgcta attcgcctac caaaggatat cccacccttt      1080
     cctcaaaagc taggatttag gcaacccgaa aagggagaga gaatttgcat ggtgggatcc      1140
     aactttcaaa caaagagcat taccagtgtg gtctcagaaa caagcacagt gatgccagta      1200
     gagaatagtc aattttggaa gcattggatt agtaccaaag atggccaatg tggtagtccg      1260
     atggtaagta caaaagatgg aaagatactc gggttacaca gtctggcaaa ctttcaaaac      1320
     tccatcaatt attttgctgc cttcccggat gatttcgctg agaaatacct gtacacgatt      1380
     gagacacatg aatgggtcaa acattggaaa tacaacacta gcggaattag ttggggctct      1440
     ttgaatattc aagcagcaca accagcaggt ttattcaagg tgagcaagct gatatcagat      1500
     cttgatggca cggcagttta tgcgcaa                                          1527
//