ID   AB188965; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188965;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR7.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; fa11d1bab25eb2429825a9fd4e7a4e29.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR7"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689N1"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689N1"
FT                   /protein_id="BAD38784.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKLSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDNT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDSPF
FT                   TDITLVQEHFGNIRMNLLGENELDPNQLRLNRTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREDELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPVS
FT                   NNICHLTNISDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTGAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 486 A; 339 C; 359 G; 343 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gaatatggag ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aaacttaagg gcaaatggaa caaaacgcta       120
     attacgcgag atgtgttggt gctttgtgga gttcttggag gtggattatg gatggttatt       180
     cagcacctgc ggtcaaagct ttccgaaccc gtaactcacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caatgcccga gataacaaga tgggtagaga agtgtacgga       300
     gatgataata ccatagagca tttcttcggt gatgcctaca caaagaaagg gaagagcaag       360
     ggtaggacac gtggtatcgg acacaagaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgta gatccactca caggagcgac gttggacgac       480
     agcccgttca cagacatcac ccttgtgcaa gagcactttg gtaatataag aatgaactta       540
     ctcggagaga atgagctaga cccaaatcaa ctgcgtttga ataggacaat tcaggcctat       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtatgtg atcttcacgc aaccattgct gggttcccag agcgagaaga cgaactgagg       720
     cagactggaa aggctcagcc cattaacata gatgaagtgc caagagctaa taacgaactc       780
     gtcccagtgg accacgagag taactccatg ttcagagggt tgcgcgacta caacccagta       840
     tcaaacaaca tttgtcatct cacaaatatt tcagatggag catcaaactc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     ctcgtgataa aatcacgaca tggtgagttt gtgattaaaa acacgactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat taggtttcag acaacctgag aagggtgaac gaatctgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagcata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcaccaaag acggccaatg cggaagtcca      1260
     atggtgagca caaaggacgg gaaaatactc ggattacaca gcctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacactg gcgccattag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagat      1500
     ctcgatagta cggcagtcta cgcacaa                                          1527
//