ID   AB188964; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188964;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: PRT1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 372006af18e598b77815a91410aa62fb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PRT1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689N2"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689N2"
FT                   /protein_id="BAD38783.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGEDDT
FT                   IEHFFGDAYTKKGKSKGRTRGMGHKNRKFVNMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDMTLVQQHFGDIRMDLLGEDELDPNELYMNKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKPQPINIDEVPKANTELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGIGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 484 A; 337 C; 372 G; 334 T; 0 other;
     accgatggga tatctcggca tttcatgagt gagtacggag cactggaagc agtccatcac        60
     caaaacacca gtgacatgag caagttcctg aagctaaagg gcaagtggaa caaaacgtta       120
     atcacgcgag atgtgttggt aatctgcgga gtactcggag gtggaatatg gatggtcatc       180
     caacatttgc gttcaaagat ttccgaacct gtaacccacg aagcgaaagg caaaaggcag       240
     agacagaagc tgaagtttcg caatgcccga gacaacaaga tgggtagaga ggtatatgga       300
     gaagacgaca ccatagagca cttctttggg gatgcctaca cgaagaaagg gaagagcaaa       360
     ggcagaacac gtggtatggg tcacaagaac aggaagttcg ttaacatgta tgggtttgat       420
     cctgaggact tttctgcagt tagatttgtg gacccgctta caggggcaac tttagatgag       480
     agtccattca cagatatgac ccttgtgcaa caacactttg gggacatacg gatggatcta       540
     cttggagagg atgagttgga cccgaacgag ttgtatatga acaagacaat tcaggcctac       600
     tatacgaaca acaaaacggg aaaggccttg aaagtggact taacgccaca catacctctc       660
     aaggtgtgtg atcttcatgc aaccattgct ggtttcccgg agcgtgaaaa cgaactgaga       720
     caaactggaa agccccagcc gattaacata gatgaagtgc ccaaggctaa cactgagctc       780
     gtcccagtcg atcacgaaag caactccatg ttcagagggt tgcgtgacta caacccgatc       840
     tcaaacaaca tttgtcatct aacaaatgtt tcagacggag catcaaattc attgtatgga       900
     atcggatttg gaccactcat actaactaac cggcatctct ttgaacggaa caacggcgag       960
     cttgtaatca aatcacgaca tggtgagttc gtgatcaaaa acacaactca gctacacttg      1020
     ttgccgattc cggacagaga cctcttgcta atcagacttc caaaagatgt cccacccttt      1080
     ccacagaaat tgggttttag acaacctgag aagggcgaga gaatttgcat ggtggggtcc      1140
     aacttccaaa ctaagagcat cacgagcata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaatagtc agttttggaa acactggatt agcacgaaag atggccaatg cggaagccca      1260
     atggtgagca caaaagatgg aaagatactc ggacttcaca gcctggcaaa tttccaaaat      1320
     tccatcaact actttgctgc ttttccagat gattttgctg agaagtatct tcacactatc      1380
     gaagcgcatg agtgggtcaa acactggaag tacaacacca gcgcaattag ttggggctct      1440
     ttgaacatac aagcagcaca gccagcaggc ttgttcaagg tgagcaagtt aatctcagac      1500
     ctcgatagta cggcagtcta cgcacag                                          1527
//