ID   AB188958; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188958;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA9.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; fb4891c56ee74928c79da8d7a6ccdb15.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA9"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689N8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689N8"
FT                   /protein_id="BAD38777.1"
FT                   /translation="SDGISRSFMSDYGALEAVHHQSTNEMSKFLKLKGKWNRTLITRDV
FT                   LVICGVLGGGVWMIIQHLQSGITEPVTHEAKGKRQRQKLKFRNARDTKMGREVYGDDDT
FT                   IEHYFGEAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPF
FT                   TDITLVQKHFGDIRTDLLAQEELEPESLRFHKTIQAYYTNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTEVVSVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNNSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TFETHEWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 500 A; 317 C; 349 G; 361 T; 0 other;
     tctgacggaa tttcccgaag ttttatgagt gattatggag cgctcgaagc agtacatcat        60
     caaagtacca atgaaatgag caagttcctt aaactgaaag gtaaatggaa cagaacatta       120
     atcacaagag acgtattggt catatgcggt gttcttggag gtggagtttg gatgattata       180
     cagcatctgc aatctggaat cacagaacct gtaactcatg aagcaaaagg caagaggcaa       240
     agacaaaaat tgaagtttcg taatgctcgc gataccaaaa tgggtaggga agtctacggg       300
     gatgacgaca ccatagaaca ctatttcgga gaagcttaca caaagaaagg gaagagcaag       360
     ggtagaacgc gtggcctcgg ccataaaaac agaaagttca tcaacatgta tggatttgac       420
     cctgaagatt tctccgcagt cagattcgtg gacccactca caggagctac attggatgag       480
     aacccattca cagatatcac ccttgtgcaa aaacactttg gagatatacg aactgactta       540
     cttgcgcaag aggaactgga gccagaatca ctgcgatttc ataaaacaat ccaggcctac       600
     tacacgaaca acaagacggg taaagctttg aaagtggatt taactccaca catgcctctc       660
     aaggtatgcg atcttcatgc aactattgct ggttttccgg aacgggaatt tgaattgagg       720
     caaactggga aagctcagcc tataagcata gacgaagtgc caaaggctaa cactgaggta       780
     gtctcagttg atcacgaaag cagttcaatg tttagaggtt tgcgtgatta caacccaata       840
     tcaaacaata tttgtcatct cacgaacaac tcagatggtg cgtcaaactc attgtatgga       900
     gttggttttg ggccactcat actaacaaat cgacaccttt ttgaacgaaa caacggggag       960
     ttattgataa aatcgcgaca tggtgagttt gtgatcagaa acacaacgca acttcatctt      1020
     ctgccaattc cagacagaga tctgctgcta attcgcttac cgaaggacat cccacctttt      1080
     ccccaaaaat tggggttcag acaacctgag aagggggaga ggatttgtat ggtgggatct      1140
     aatttccaga cgaagagcat tactagcgtg gtctcagaga ctagcacagt tatgccagtg      1200
     gagaacagtc aattttggaa acactggatc agtactaaag atggtcaatg cggtagccca      1260
     atggtgagca cgaaggacgg aaagatactt gggttgcata gtctagccaa tttccaaaac      1320
     tccatcaact atttcgctgc ctttccagat gacttcgccg aaaaatatct ccacacattt      1380
     gagacgcatg aatgggtcaa acactggaag tacaacacta gcgggatcag ttggggctct      1440
     ctaaatattc aagcagcaca gccagcaggt ttattcaaag tgagcaaact aatatcagat      1500
     ctcgacagta cagcagttta tgcacaa                                          1527
//