ID   AB188957; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188957;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA8.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 5b8812a826756ceb9820a4bebac1a57b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA8"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689N9"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689N9"
FT                   /protein_id="BAD38776.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGMWMIVQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDV
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDISLVQKHFGDIRMDLLEEDELDPNELRKNKTIQAYYMNNKTGKALKVDLTPHVPLKV
FT                   CDLHATIAGFPEREHELRQTGKAQPINIDEVPKANNELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 484 A; 327 C; 364 G; 352 T; 0 other;
     actgatggga tatctcgtca tttcatgagt gaatatggag cgctcgaggc agttcaccat        60
     cagaacacca atgacatgag taagttcctg aagctaaagg gcaagtggaa caaaacgcta       120
     atcacacgag atgtgttggt gatctgtgga gttcttggag gtgggatgtg gatgattgtc       180
     caacacctgc gttcgaaaat ctccgaacct gtaacccatg aagcaaaagg aaagaggcaa       240
     agacagaaac tgaagtttcg caatgcccga gacaacaaga tgggtagaga ggtatacgga       300
     gatgatgacg tcattgaaca cttctttgga gatgcctaca caaagaaggg aaagagcaaa       360
     ggcagaacac gtggcctcgg ccataagaac aggaaattca tcaatatgta tggattcgat       420
     cctgaagact tctcagcagt tagatttgtg gatccactca caggagccac actggacgat       480
     aatccgttta cagacatctc ccttgtgcaa aagcattttg gagatattcg aatggatcta       540
     cttgaagaag acgaactgga tccgaatgag ttgcggaaga ataagacaat tcaggcctac       600
     tacatgaaca acaaaacagg taaggctctg aaagtggatc ttacaccaca cgtaccactc       660
     aaggtgtgtg accttcatgc aaccattgct ggtttcccgg aacgagaaca cgaacttaga       720
     cagactggaa aagctcagcc aatcaacata gacgaagtgc ccaaggctaa taatgagctg       780
     gtcccagtcg accacgaaag tagctccatg ttcagaggtt tgcgcgacta caatccgatt       840
     tctaacaaca tttgtcattt aacaaatgta tcagacggag catcaaactc gttgtatggt       900
     gttggttttg ggccactcat actaacgaac cggcatcttt tcgaacggaa taatggtgag       960
     ctagtaatta aatctagaca tggtgagttt gtgatcaaaa acacaactca actacatttg      1020
     ctaccaattc cggatcgaga tttgttgctg atccgattac caaaggacat cccacccttc      1080
     ccgcagaaat taggctttcg acaacctgag aagggtgaga ggatttgtat ggtgggatcc      1140
     aacttccaaa caaagagcat tacgagtgtg gtctctgaga ccagcacgat tatgccagtg      1200
     gaaaatagcc aattttggaa gcattggatt agtactaagg atggccaatg tgggagccca      1260
     atggtgagca caaaagatgg gaagatactc gggctacata gcctagcgaa tttccagaac      1320
     tccatcaact actttgctgc tttcccagat gattttgctg agaagtatct ctacaccatc      1380
     gaagcacatg agtgggtcaa gcactggaag tacaacacta gtgcgattag ttggggctcg      1440
     ctgaacatac aagcctcgca accagcaggc ttgttcaaag tgagtaaact catctcagac      1500
     cttgacagca cagcagtgta tgcacaa                                          1527
//