ID   AB188952; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188952;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC45.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; e51797ab9b20375f1370c1204146de98.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC45"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689P4"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689P4"
FT                   /protein_id="BAD38771.1"
FT                   /translation="TDGISRSFMREYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGVWMILQSLKSGVTESVTHEAKGKRQRQKLKFRNARDSKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFVNMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDITLVQKHFGDIRTDLLEDDEIEPQALQSHKTIHAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERELELRQTGKAQPISIDEVPKANTELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELIIKSRHGEFVIRNTTQLQL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEIHDWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 502 A; 315 C; 345 G; 365 T; 0 other;
     actgatggta tttctcggag tttcatgcgc gagtatggag cacttgaagc agttcaccac        60
     caaaatacca acgatatgag caaattcctt aaacttaagg gcaaatggaa caaaacacta       120
     atcacaagag atgtgttggt tatttgtgga gttcttggag gtggagtttg gatgatcttg       180
     cagagcctga agtctggagt cactgaatcc gtaacacatg aagcgaaagg caagaggcaa       240
     agacagaaac tgaagttccg caacgctcga gacagcaaaa tgggtagaga agtctatggg       300
     gatgatgaca ctatagaaca cttctttgga gatgcctaca caaagaaggg aaaaagcaaa       360
     ggtaggacac gtggtattgg ccacaaaaac agaaaattcg tcaatatgta tggatttgat       420
     cctgaagatt tctctgcagt cagattcgta gacccactta caggagcaac attggatgaa       480
     agtcctttta cagatatcac tcttgttcag aaacattttg gggatatacg caccgacttg       540
     cttgaggatg acgaaattga accacaggca ttacaatccc ataaaacaat ccatgcttac       600
     tacacgaaca ataaaacagg taaggccttg aaagtggact taacaccaca catacctctc       660
     aaagtatgcg atcttcatgc caccatcgct ggtttcccag aacgagaact cgagttgagg       720
     cagactggaa aggctcaacc cataagcata gatgaagtgc ctaaagctaa caccgaattg       780
     gtcccggtcg accatgaaag taattccatg ttcagaggat tgcgcgatta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgta tcagatgggg cgtcgaactc gttgtatggg       900
     gttggttttg gaccactcat attaacaaat cggcatcttt ttgaacggaa caatggagag       960
     cttataataa aatcgcgaca cggcgaattt gtgatcagga atactacgca actccagctg      1020
     ctgccaatcc cggacaggga tctattgcta atccgcttac caaaggacat tccacccttc      1080
     ccgcaaaaac taggattcag acaacccgaa aagggagaga gaatctgcat ggtaggatcc      1140
     aattttcaaa cgaagagcat taccagcgtg gtttcagaga ctagtacaat aatgccagtg      1200
     gagaatagtc aattttggaa gcattggatt agcacaaaag atggtcaatg tggtagccca      1260
     atggtgagca caaaggatgg aaagatactt ggacttcaca gtttagccaa tttccaaaac      1320
     tccatcaatt atttcgctgc tttcccagat gattttgccg agaaatacct tcatacgatc      1380
     gagatacatg attgggttaa gcattggaaa tataacacta gtgggattag ttggggctct      1440
     ttgaacattc aagcagcaca gccagcaggt ctgttcaagg tgagcaagtt aatatcagat      1500
     ctcgacagca cagcagttta tgcgcaa                                          1527
//