ID   AB188951; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188951;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC44.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 38a7b3d9f60e3d257dfbb67f804a6488.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC44"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689P5"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689P5"
FT                   /protein_id="BAD38770.1"
FT                   /translation="TDGISRNFMSEYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVLQRLQSGVTESVVHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFVNMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDITLVQKHFGDIRTDLLEEDEIEPQALQYHKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIETHEWVKHWKYNTSGVSWGSLSIQAAQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 503 A; 310 C; 344 G; 370 T; 0 other;
     accgatggga tttctcgaaa ttttatgagt gaatatggag cacttgaagc cgttcaccac        60
     caaagcacca acgatatgag taaattcctt aagctcaagg gtaagtggaa caagacacta       120
     attacgagag atgtactagt tatttgtgga gtccttggag gtggaatttg gatggttttg       180
     cagcgattgc aatctggagt caccgaatcc gtagtacatg aagcaaaagg caaaaggcag       240
     agacaaaagt tgaagttccg taacgcccga gacaacaaga tgggcaggga agtttacggg       300
     gacgatgata ctatagaaca cttctttgga gacgcctaca cgaagaaggg aaaaagcaaa       360
     ggtagaacac gtggtcttgg tcacaagaac agaaaattcg tcaatatgta tggatttgat       420
     cctgaagatt tctctgcagt cagattcgta gacccactta caggagcaac attggatgaa       480
     agtcctttca cagacatcac tcttgttcag aaacactttg gagatatacg aactgactta       540
     cttgaggaag atgaaattga accacaggca ctacaatacc acaagacaat ccaggcctac       600
     tacacgaaca ataaaacagg taaagcattg aaggtggact taacaccaca catacctctc       660
     aaggtgtgtg atcttcatgc aaccattgct ggttttccag aacgtgaatt cgaactgagg       720
     cagactggaa aagctcaacc cataagtata gacgaagtgc ctaaagctaa taccgagtta       780
     gtccctgttg accacgaaag tagttccatg ttcagaggat tgcgcgatta caacccaata       840
     tcaaataaca tttgtcatct tacaaatgtt tcagatgggg catcaaactc attgtatgga       900
     gttggttttg gaccactcat attaacgaat cggcatcttt ttgaacgtaa caatggagag       960
     ctcctgataa agtcgcgaca cggtgaattt gtgattagaa atacaacgca actccatttg      1020
     ttgccaattc cagacaggga cttgttgcta attcgcctac cgaaggacat cccacccttc      1080
     cctcaaaagc taggattcag gcaacccgaa aagggagaaa gaatttgcat ggtgggatcc      1140
     aacttccaaa caaagagcat taccagtgta gtctcagaaa caagcacagt gatgccagta      1200
     gagaatagtc aattttggaa gcattggatt agtaccaaag acggtcaatg tggtagtccg      1260
     atggtaagta caaaagatgg aaagatactc gggctgcata gtctggcaaa ttttcaaaac      1320
     tccatcaatt atttcgctgc cttcccagat gatttcgctg agaaatacct gtacacgatt      1380
     gagacacatg aatgggtcaa acattggaaa tacaacacca gtggagttag ttggggctct      1440
     ttgagtatcc aagcagcaca accatcaggt ttattcaagg tcagcaagct gatttcagat      1500
     cttgatagca cggcagttta tgcgcaa                                          1527
//