ID   AB188949; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188949;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC42.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 596eb31c46b015bc2be9391ebad6fb2f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC42"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689P7"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689P7"
FT                   /protein_id="BAD38768.1"
FT                   /translation="SDGISRSFMSDYGALEAVHHQSTNEMSKFLKLKGKWNRTLITRDV
FT                   LVICGVLGGGIWMIIQRLQSGITEPVTHEAKGKRQRQKLKFRNARDTKMGREVYGDDDT
FT                   IEHYFGEAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPF
FT                   TDITLVQKHFGDIRTDLLAQDELEPESLRFHKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTEVVSVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNNSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQMKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDNFAEKYLH
FT                   TFETHEWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 497 A; 308 C; 350 G; 372 T; 0 other;
     tctgacggaa tttcccgaag ttttatgagt gattatggag cgcttgaagc agtacatcat        60
     caaagtacta atgaaatgag taagttcctt aaactgaaag gtaaatggaa cagaacatta       120
     atcacaagag atgtattggt catatgcggt gttcttgggg gtggaatttg gatgattata       180
     cagcgcctgc aatctggaat cacagaacct gtaactcatg aagcaaaagg caagaggcaa       240
     agacaaaaat taaagtttcg taatgctcga gacaccaaaa tgggtagaga agtctacggg       300
     gatgacgaca ccatagaaca ctacttcggc gaagcctaca caaagaaagg aaagagtaag       360
     ggtagaacgc gtggcctcgg ccataaaaac agaaagttca tcaacatgta tggatttgac       420
     cctgaagatt tctccgcggt tagattcgtg gacccactca caggagctac gttggatgag       480
     aacccattca cggatatcac ccttgtgcaa aaacactttg gagatatacg aactgattta       540
     cttgcacaag atgaattgga gccagaatcg ctacgatttc ataagacaat ccaggcctac       600
     tacacgaaca acaagacggg caaagctttg aaagtggatt taactccaca catccctctc       660
     aaggtatgcg accttcatgc aactattgct ggttttccgg agcgggaatt tgaattgagg       720
     caaactggga aagctcagcc tataagcata gacgaagtgc caaaggctaa cactgaggta       780
     gtctcagttg atcacgaaag cagttcaatg tttagagggt tgcgtgatta caacccaata       840
     tcaaacaata tttgtcatct cacgaacaat tcagatggtg cgtcaaactc attgtatgga       900
     gtcggttttg ggccacttat attaacaaac cgacacctgt ttgaacgaaa caatggagag       960
     ttgctgataa aatcgcgaca tggcgagttt gtgatcagga acacaacgca acttcatctt      1020
     ttgccaattc cggacagaga tctattgcta attcgtttgc caaaggacat cccacctttt      1080
     ccccaaaaat tggggttcag acaacctgag aaaggggaga ggatttgtat ggtgggatct      1140
     aattttcaga tgaagagcat tactagtgtg gtctcagaga ccagcacagt tatgccagtg      1200
     gagaatagcc agttctggaa acattggatc agtactaaag atggtcaatg cggtagccca      1260
     atggtgagca cgaaggacgg aaagatactt ggattgcata gtttagctaa tttccaaaac      1320
     tccatcaact attttgccgc ctttcccgat aactttgctg agaaatatct ccacacattt      1380
     gagacacatg aatgggtcaa acactggaag tacaatacta gcgggatcag ttggggctct      1440
     ctaaatattc aagcagccca gccagcaggt ttattcaaag tgagcaaact aatatcagat      1500
     ctcgatagca cagcagttta tgcacaa                                          1527
//