ID   AB188948; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188948;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   13-DEC-2004 (Rel. 82, Last updated, Version 3)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate:GRC41.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 4325edaf56d84a4a92b6d0eaa176adf4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC41"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689P8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689P8"
FT                   /protein_id="BAD38767.1"
FT                   /translation="TDGISRSFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMILQRLQSGVTEPVTHEAKGKRQKQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDITLVQQHFGDIRADLLEEDALEPQALQYHKTVQAYYMNNKTGKALKVDLTPHTPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANAELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQAKSITSIISETSTVMP
FT                   VENSHFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIETHEWVKHWKYNTSGVSWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 485 A; 324 C; 362 G; 356 T; 0 other;
     accgatggaa tttctcggag tttcatgagt gaatatggag cacttgaagc agtccaccac        60
     caaaacacca acgacatgag taagttcctt aagcttaagg gcaagtggaa caaaacgttg       120
     atcacaagag atgtgttggt tatttgcgga gttcttggag ggggaatttg gatgatttta       180
     cagcgcctcc aatctggagt cactgaacct gtaacgcacg aagcgaaggg caagaggcaa       240
     aaacagaagc tgaaattccg caatgctcga gacaacaaga tgggtaggga agtctacggg       300
     gatgatgaca ctatagaaca cttctttggg gatgcctaca caaagaaggg aaagagtaaa       360
     gggaggacac gtggtcttgg tcacaaaaac agaaaattca ttaatatgta tggatttgat       420
     cctgaagatt tctccgcagt tagattcgta gacccactta cgggagcgac actggacgaa       480
     agtcctttta cggatataac tctcgttcaa caacattttg gagatatacg agctgatcta       540
     ctcgaagagg atgcacttga accacaggca ctccaatatc ataaaacagt ccaggcctac       600
     tacatgaaca acaaaacagg aaaggctttg aaggtagact taacaccaca cacacctctc       660
     aaagtgtgcg atcttcacgc aaccattgct gggtttccgg aacgagagtt cgaattgaga       720
     caaactggaa aagcccagcc cattagcata gacgaagtgc ctaaagccaa cgctgaattg       780
     gttccagttg accacgagag cagttccatg tttagagggt tgcgcgatta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatgggg catcaaattc attgtatggg       900
     gttggttttg gaccgctcat actaacgaat cggcatctct ttgaacgaaa caatggagaa       960
     ctcctaataa agtcgcgaca tggtgagttt gtgatcagga atacaacgca actccacttg      1020
     ctgccgattc cggacagaga tctgctgcta attcgtctac cgaaggacat tccacccttc      1080
     cctcaaaagc taggattcag gcaacctgag aagggcgaga gaatttgcat ggtgggatcc      1140
     aacttccaag cgaagagcat taccagtata atctcggaaa ctagcacagt aatgccagtg      1200
     gagaatagtc atttttggaa acattggatt agtaccaaag atgggcagtg tggtagtccg      1260
     atggtgagta caaaagacgg aaaaatactc ggattgcaca gcctggctaa tttccaaaat      1320
     tccatcaatt acttcgctgc cttcccagac gattttgctg aaaaatacct ccatacgatt      1380
     gagacacatg aatgggtcaa gcattggaaa tacaatacca gtggggttag ttggggctct      1440
     ctaaacattc aagcagcaca accagccggg ttgtttaagg tgagcaagtt gatatcagat      1500
     cttgatagca cagcggtcta tgcgcaa                                          1527
//