ID   AB188947; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188947;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC32.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 2af84d2f6da0c3b492794bb44d92ac3d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC32"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689P9"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689P9"
FT                   /protein_id="BAD38766.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNELRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPISMDEVPRANNELTPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 478 A; 343 C; 369 G; 337 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagcttaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt actttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttccgaaccc gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac tgaagtttcg caatgcccga gacaacaaga tgggtagaga agtatacgga       300
     gatgatgaca ccatagagca tttctttggt gatgcctaca caaagaaagg gaagagcaag       360
     ggtaggacac gtggtatcgg acacaaaaac aggaagttca tcaacatgta cgggtttgat       420
     cctgaagact tttctgcagt tcgtttcgtg gatccactca caggagcaac gttggacgac       480
     aacccgctca cagacatcac ccttgtacaa gagcactttg gtaacataag aatggatcta       540
     ctcggagagg atgagctgga cccaaatgag ttacgagtga acaagacgat ccaggcctac       600
     tacatgaaca ataaaacagg caaggctctg aaggtggacc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccag agagagaaaa tgaactgagg       720
     caaactggaa aggctcagcc tatcagtatg gatgaagtgc cgagagccaa caacgaactc       780
     accccagttg atcacgaaag taactccatg ttcagagggt tgcgcgatta caacccaatc       840
     tcgaacaaca tttgtcacct tacaaatgtg tcagacgggg catcaaattc actatatgga       900
     gttggttttg ggccacttat actaacgaac cgacatctct ttgagcggaa caacggcgag       960
     cttgtaataa agtcacgaca tggtgagttc gtgattaaaa acacaactca gctacatcta      1020
     ctcccaatac cggatagaga tctcttgcta atccggttgc caaaggatgt cccgcccttc      1080
     ccgcagaaat tgggtttcag gcaacctgaa aagggcgagc gaatttgcat ggttggatcc      1140
     aatttccaga ctaagagcat aacgagtata gtttctgaga ctagcacgat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg tggaagtcca      1260
     atggtgagca caaaggacgg gaaaatactc ggattgcaca gcttagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct ccacaccatt      1380
     gaagcacacg aatgggttaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ctgaacatac aagcttcaca accgtcaggc ttgtttaaag taagcaagtt gatctcagac      1500
     ctcgatagca cggcagtcta cgcgcaa                                          1527
//