ID   AB188946; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188946;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC31.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; ed3293ca649b397a3bc9c2d0010b87ae.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC31"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q0"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q0"
FT                   /protein_id="BAD38765.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPININEVPRANNELVSVDHESTSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 491 A; 336 C; 357 G; 343 T; 0 other;
     accgatggaa tatctcgaca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagctcaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttctgaaccc gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caatgcccgg gacaacaaga tgggtagaga agtgtacgga       300
     gatgatgata ccatagagca tttctttggt gatgcctaca caaagaaagg gaagagcaag       360
     ggtaggacac gtggtatcgg acacaaaaac aggaagttca tcaacatgta tgggttcgat       420
     cctgaagact tctctgcagt tcgttttgtg gatccactca caggagcaac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gaacacttcg gtaacataag aatggacctg       540
     ctcggagagg atgagctaga cccaaatgaa atacgtgtga ataagacaat tcaggcctat       600
     tacatgaaca ataaaacagg caaggccttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct gggttcccag aacgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc cattaacata aacgaagtac caagagctaa taacgaactc       780
     gtttcagtgg accacgagag tacctccatg ttcagagggt tgcgtgacta caacccaata       840
     tcaaacaata tttgtcatct cacaaatgtt tcagatggag cgtcaaactc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgaacggaa taacggtgaa       960
     ctcgtaataa aatcacgaca tggcgagttc gtgattaaaa atacaactca gctgcatttg      1020
     ctaccgattc cagacagaga tcttctgtta atccggttac caaaggacgt cccacccttt      1080
     ccacaaaaat tgggtttcag gcaacctgag aaaggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc aattttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca cgaaggacgg gaaaatactc ggattacaca gtctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgctg agaaatatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ttgaatatac aagcatcaca accgtcaggc ttgttcaagg taagtaagct aatctcagac      1500
     cttgatagca cggcagtcta cgcacaa                                          1527
//