ID   AB188945; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188945;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC18.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; b389fbd4f9135eb55d2305ef9be3971b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC18"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q1"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q1"
FT                   /protein_id="BAD38764.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPL
FT                   TDITLVQEHFGNIRMDSLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVSVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 484 A; 342 C; 365 G; 336 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagcttaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttctgaaccc gtaacccacg aagcaaaagg caagaggcag       240
     agacagaaac tgaagtttcg caatgcccga gacaacaaga tgggtagaga agtgtacggg       300
     gatgatgaca ccatagagca tttctttggt gatgcctaca caaagaaggg gaagagcaag       360
     ggtagaacac gtggtatcgg acacaaaaac aggaagttta tcaacatgta tgggttcgac       420
     cctgaagact tctctgcagt tcgtttcgtg gatccgctca caggagcgac gttggacgaa       480
     aacccgctca cagatatcac ccttgtgcaa gagcactttg gtaacataag aatggactca       540
     ctcggagagg atgagctaga cccaaatgaa atacgtgtga ataagacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccag aacgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc catcaacata gacgaagtgc caagagctaa taacgaactc       780
     gtctcagtgg accacgagag taactccatg ttcagagggt tgcgcgacta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatggag catcgaactc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgagcgcaa taacggtgaa       960
     ctcgtaataa aatcacggca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggtttcag gcaacctgag aagggtgaac ggatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctccgaga ctagcacaat aatgccagtg      1200
     gagaacagtc aattttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca cgaaggacgg gaaaatactc ggattacaca gcctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgctg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacacta gcgccatcag ttggggttct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgatagca cggcagtcta cgcacaa                                          1527
//