ID   AB188944; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188944;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC17.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 194d1ea774bc277643875af7b4c519ee.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC17"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q2"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q2"
FT                   /protein_id="BAD38763.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 488 A; 344 C; 361 G; 334 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca gtgacatgag caagttcctc aagcttaagg gcaaatggaa caaaacgcta       120
     atcacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttccgaaccc gtaacccacg aagcgaaggg caagagacaa       240
     aggcagaaac taaagtttcg caatgcccga gacaacaaga tgggtagaga agtgtatgga       300
     gatgatgata ccatagagca cttcttcggc gacgcctaca caaagaaagg gaagagcaag       360
     ggcaggacac gtggcatcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgtg gatccactca caggagcgac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggggaag atgagctgga tccaaatgaa atacgcgtga ataaaacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggacc ttacaccaca catacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccag agcgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc cattaacata gacgaagtgc caagagctaa taacgaactc       780
     gtcccagtag accacgagag taactccatg ttcagagggt tgcgtgacta caacccaata       840
     tcaaacaaca tttgccatct cacaaatgtt tcagatggag catcaaactc gttgtatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     cttgtaataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggtttcag gcaacctgag aaaggtgaac ggatttgcat ggtgggatcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaaa ccagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcacgaaag acggccagtg cggaagtcca      1260
     atggtgagca cgaaagacgg gaaaatactt ggattacaca gcctagcgaa ctttcagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcattggaag tataacacta gtgccatcag ttggggctct      1440
     ttaaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgatagca cggcagtcta cgcacaa                                          1527
//