ID   AB188941; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188941;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC2.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; b3185b8f3b77af4eb0860ce1c22384c7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q5"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q5"
FT                   /protein_id="BAD38760.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKMSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 487 A; 341 C; 362 G; 337 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agtccaccat        60
     cagaacacca gcgacatgag caagttcctc aagcttaagg gtaaatggaa taaaacgctt       120
     attacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaaaat gtccgaaccc gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaaatttcg caatgcccga gacaacaaaa tgggtagaga agtgtacggg       300
     gatgatgaca ccatagagca tttcttcggt gatgcctaca caaagaaagg aaagagcaag       360
     ggtaggacac gtggtatcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgtg gatccactca caggagcgac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggagagg atgagctaga cccaaatgaa atacgtgtga ataagacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccag agcgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc cattaatata gacgaagtgc caagagctaa taacgaactc       780
     gtcccagtgg accacgagag taactccatg ttcagagggt tgcgtgacta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatggag catcaaactc gttatatgga       900
     gttggtttcg gaccgctcat actaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     ctcgtaataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacaaaaat tgggtttcag gcaacctgag aaaggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag atggccaatg cggaagtcca      1260
     atggtgagca cgaaggacgg gaaaatactc ggattacaca gcctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtacct tcataccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgatagca cggcagtcta cgcacaa                                          1527
//