ID   AB188939; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188939;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR57.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; b5099e54dd96fc7245afcfd24333247a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR57"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q7"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q7"
FT                   /protein_id="BAD38758.1"
FT                   /translation="ADGISRHFMSGYGALEAVHHQSTNEMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVIQHLRSRISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGEDELDPNEIRVNKTIQAYYTNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPKANNELVPVDHESNSMFRGLRDYNPVS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSSIMP
FT                   VENSHFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFVEKYLH
FT                   TIETHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 488 A; 335 C; 368 G; 336 T; 0 other;
     gccgatggga tatctcggca cttcatgagt gggtatggag cactcgaggc agtccaccat        60
     caaagcacca atgaaatgag caagttcctg aagcttaagg gcaagtggaa taaaacgctg       120
     atcacgcgag acgtgttggt gatctgtgga gtgcttggag gtggaatatg gatggtcatt       180
     cagcacttac gttcaagaat ttccgagccc gtaacccatg aagcgaaagg caagaggcaa       240
     agacagaaac tgaagtttcg caatgcccga gacaataaaa tgggtagaga agtgtatgga       300
     gacgatgaca ccatagaaca tttctttggg gatgcctaca cgaagaaggg aaagagcaaa       360
     ggtagaacac gtggtatcgg tcacaaaaac aggaaattca tcaatatgta tggatttgat       420
     cctgaagact tctctgcagt taggttcgtg gatccgctca caggagcaac gctagacgac       480
     aatccattca cagacatcac tcttgtgcaa aagcactttg gtgacataag aatggactta       540
     ctcggagagg atgagcttga cccgaacgag atacgtgtga acaaaacaat ccaggcctac       600
     tacacgaaca ataaaacagg caaggctttg aaggtggatc tgacaccgca catgcctctc       660
     aaggtgtgcg acctccatgc aaccatcgcc ggattcccag agcgagagaa tgaactaagg       720
     caaactggaa aagctcagcc tatcaacata gatgaagtgc caaaggccaa caacgagctt       780
     gtcccagtcg accatgagag taactccatg ttcagagggt tgcgcgacta caacccggta       840
     tcaaataaca tttgtcatct aacaaatgtg tcagatggag catcaaattc gttatatgga       900
     gttggttttg ggccgctcat attaacgaac cgacatctct ttgaacggaa caatggtgaa       960
     cttgtgataa agtcacgtca tggtgagttt gtgatcaaaa acacaactca attacacttg      1020
     ctaccaattc cggacagaga tcttctgctg atcagattac cgaaggacat cccaccgttt      1080
     ccacagaaac taggcttcag gcaacccgag aagggtgaga gaatctgcat ggtagggtcc      1140
     aatttccaaa ctaagagcat cacgagtata gtttctgaga ctagctcaat aatgccagtt      1200
     gagaacagtc atttttggaa acactggatc agtactaaag atggccaatg tggaagcccg      1260
     atggtgagca caaaggatgg aaaaatactt gggctacaca gcctggcaaa cttccaaaat      1320
     tccatcaact atttcgctgc ttttccagat gattttgtcg agaagtatct tcacaccatt      1380
     gaaacacatg agtgggtcaa gcactggaag tataacacta gcgcaattag ttggggctcc      1440
     ttgaatatac aagcatcgca accggcaggc ctgttcaaag tgagcaagct aatttcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//