ID   AB188938; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188938;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR51.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; d67a4be76ff6833719cfb77b0b6f8e35.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR51"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q8"
FT                   /protein_id="BAD38757.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNEMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVAHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELIPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGIGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSHFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 492 A; 321 C; 363 G; 351 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca acgaaatgag taaattcctc aagcttaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt actttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttccgaaccc gtcgcccacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caatgcacga gataacaaga tgggtagaga agtgtacgga       300
     gatgatgata ccatagagca tttctttggt gatgcataca caaagaaagg gaaaagcaag       360
     ggtaggacac gtggtatcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgta gatccactca caggagcgac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggagagg atgagctaga cccaaatgaa atacgtgtga ataaaacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catgcccctc       660
     aaggtatgtg accttcacgc aactattgct ggattcccag agcgagagaa tgaactgagg       720
     cagactggaa aggcccaacc catcaacata gacgaggtgc caagagccaa caatgaactc       780
     atcccagtgg accatgaaag caactccatg ttcagagggt tgcgagacta caatccgatt       840
     tcgaacaaca tttgtcactt aacaaatgta tcagatggag catcaaattc attgtatgga       900
     attgggtttg gaccactcat actcacgaat cgacaccttt ttgaacggaa caatggtgag       960
     cttgtgataa aatctcgaca tggtgagttt gtgatcaaga acacaactca gttacatttg      1020
     ttgccgattc cggacagaga tcttctgttg atcaggttac cgaaagatgt tccacccttt      1080
     ccgcagaaac taggcttcag acaacctgag aagggtgaga ggatttgcat ggtaggatcc      1140
     aatttccaaa ctaaaagcat tacaagcata gtctctgaga ctagcacaat aatgccagta      1200
     gagaacagtc atttttggaa acactggatc agcacgaaag atggtcaatg tggaagcccg      1260
     atggtgagca caaaggatgg aaaaatactc gggttacaca gtctagcgaa ttttcagaac      1320
     tccatcaact atttcgctgc ttttccggat gattttgccg agaagtatct ccacactatc      1380
     gaagcacacg agtgggttaa gcactggaaa tacaacacta gcgcaatcag ttggggctct      1440
     ttgaatatac aagcatcaca accagcaggc ttgttcaagg tgagcaagtt gatttcagac      1500
     cttgatagca cggcagtcta cgcacaa                                          1527
//