ID   AB188937; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188937;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR50.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 5f78eafd92377f23125b9812f2c1e631.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR50"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Q9"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Q9"
FT                   /protein_id="BAD38756.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICYLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 487 A; 340 C; 363 G; 337 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatgggg ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagctcaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttagt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttccgagccc gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaagttccg caatgcccga gacaacaaga tgggtagaga agtgtatgga       300
     gatgatgaca ccatagagca tttcttcggt gatgcctaca caaagaaagg gaagagcaaa       360
     ggtaggacac gtggaatcgg acacaagaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgta gatccactca caggagcgac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggagagg atgagctaga cccaaatgaa atacgtgtga ataagacgat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctt       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccag agcgagaaaa tgaactgagg       720
     cagactggaa aggctcagcc cattaacata gacgaagtgc caagagctaa taacgaactc       780
     gtcccagtgg accacgagag taactccatg ttcagaggat tgcgtgacta caatccaata       840
     tcaaacaaca tttgttatct cacaaatgtt tcagatggag catcaaactc gttatatgga       900
     gtcggtttcg gaccactcat actaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     cttgtgataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggtttcag gcaacctgag aagggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca cgaaggacgg aaagatactc ggattacaca gcctagcaaa cttccagaac      1320
     tccatcaatt actttgccgc tttcccagat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacacta gcgccatcag ttggggctcc      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatttcagac      1500
     ctcgatagca cggcagtcta cgcacaa                                          1527
//