ID   AB188936; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188936;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR38.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 153be1dc740243f9d7e8345899d7ab19.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR38"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689R0"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689R0"
FT                   /protein_id="BAD38755.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSRISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATMDDNPL
FT                   TDITLVQEHFGNIRMDLLGEDELDPNETRVNKTIQAYYMNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTGAISWGSLNIQASQPSGLFKVGKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 485 A; 344 C; 368 G; 330 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gagtatggag ctcttgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagcttaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt actttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaagaat ttccgaacct gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac tgaagtttcg caatgcccga gataacaaga tgggtagaga agtgtacgga       300
     gatgacgata ccatagagca tttcttcggt gatgcctaca caaagaaagg gaagagcaag       360
     ggtaggacac gtggcatcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgta gatccactca caggagcgac gatggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcattttg gtaacataag aatggactta       540
     ctcggagagg atgagctaga tccaaatgaa acacgcgtga ataagacaat tcaggcctac       600
     tacatgaaca ataaaacagg taaggctttg aaggtggacc tgacaccaca catgcccctc       660
     aaggtgtgtg accttcacgc aaccattgct ggattcccag agcgagagaa tgaactgagg       720
     cagactggaa aggcccagcc catcaacata gacgaggtgc caagagccaa caacgaactc       780
     gtcccagtgg accacgaaag caactccatg ttcagagggt tgcgagacta caacccgatt       840
     tcaaacaaca tttgtcatct aacaaatgta tcagatggag catcgaattc attgtatgga       900
     gttgggtttg gaccactcat actaacgaat cgacaccttt tcgaacggaa caatggtgag       960
     cttgtgataa aatctcgaca tggtgagttc gtgatcaaga acacaactca gctacactta      1020
     ttgccgattc cggacagaga tctcctgtta atcaggctac cgaaagatgt tccacccttt      1080
     ccgcagaaac taggtttcag gcaacctgaa aagggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagcata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca caaaggacgg aaaaatactc ggattgcaca gcctagcaaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtacct tcataccatt      1380
     gaagcacacg aatgggtcaa gcactggaag tataacactg gcgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgtttaaag taggcaagct aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//