ID   AB188932; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188932;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR30.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 607e66b4ae8a5de4c76f349afc3651d2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR30"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689R4"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689R4"
FT                   /protein_id="BAD38751.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKMSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPL
FT                   TDITLVQEHFGNIRMDLLGENELDPNEIRVNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 487 A; 342 C; 364 G; 334 T; 0 other;
     actgatggaa tatctcggca ttttatgagt gagtatggag ctctcgaggc agttcaccat        60
     caaaacacca gcgacatgag caaattcctc aagcttaagg gcaaatggaa taaaacgcta       120
     attacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat gtccgaaccc gtaacccacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaaatttcg caatgcccga gacaacaaga tgggtagaga agtgtacgga       300
     gatgatgata ccatagagca tttcttcggt gatgcctaca caaagaaagg gaagagcaag       360
     ggcaggacac gtggtatcgg acacaagaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgtg gatccactca caggagcgac gttggacgac       480
     aacccgctca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatggactta       540
     ctcggggaga atgagctgga tccaaatgaa atacgtgtga ataagacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgcg atcttcacgc aaccattgct ggattcccag agcgagaaaa tgaactgagg       720
     cagactggaa aggctcagcc cattaacata gacgaagtgc caagagctaa taacgagctc       780
     gtcccagtgg accacgagag taactccatg ttcagagggt tgcgtgacta caacccaata       840
     tcaaacaaca tttgtcacct cacaaatgtt tcagatggag catcaaactc gttatatgga       900
     gtcggttttg gaccactcat attaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     ctcgtaataa aatcacgaca tggcgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat taggtttcag gcaacctgag aagggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagcata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatc agcacgaaag acggccaatg cggaagtcca      1260
     atggtgagca cgaaagacgg gaaaatactc ggattacaca gcctagcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg aatgggtcaa gcattggaag tataacacta gtgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//