ID   AB188930; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188930;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR8.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 0341f18578f4e60e683e0ac1487a3216.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR8"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689R6"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689R6"
FT                   /protein_id="BAD38749.1"
FT                   /translation="TDGISRSFMRDYGALEAVHHQSTNEMSKFLQLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVVQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGEDELDPNEIRVNKTIQAYYMNNKAGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPISIDEVPRANNELIPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLNSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 499 A; 339 C; 361 G; 328 T; 0 other;
     actgacggaa tatctcggag ctttatgaga gattacggag cactcgaggc agttcaccat        60
     caaagcacta atgaaatgag caagttccta cagctcaagg gcaagtggaa caaaacgcta       120
     atcacacgag atgtgctggt catttgcgga gtacttggag gaggaatatg gatggttgtc       180
     caacacttac gctcaaaaat ttctgagccc gtaactcatg aggcgaaagg caagaggcaa       240
     agacagaaac tgaagtttcg caatgcccga gacaacaaaa tgggtaggga agtgtatgga       300
     gacgacgaca ccatagagca tttctttgga gatgcctaca caaagaaagg aaagagcaaa       360
     ggcaggacgc gtggcatcgg gcacaaaaac aggaagttca ttaacatgta tggctttgat       420
     cctgaagatt tctctgcagt taggttcgta gatccactca caggagcgac actagacgat       480
     aatccattca cagacatcac ccttgtgcaa aagcactttg gtgacataag aatggattta       540
     ctcggagagg atgaactgga cccaaatgag atacgagtga acaagacaat ccaggcgtac       600
     tacatgaaca ataaagcagg taaagctttg aaggtcgatc tgacaccaca catacctctc       660
     aaggtgtgtg accttcatgc aaccattgcc ggattcccag agagagaaaa cgaattgaga       720
     cagactggaa aggctcagcc tatcagtata gatgaagtgc cgagagccaa caacgaactc       780
     atcccagtgg accatgagag caactccatg ttcagagggc tgcgtgacta caacccaatc       840
     tcgaacaaca tttgtcacct tacaaatgtg tcagatggag catcaaactc gttatatgga       900
     gtcggtttcg ggccactcat attaacgaac cgacacctct ttgagcggaa caacggtgag       960
     ctcgtaataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttttgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggtttcag gcaacctgag aaaggtgaac gaatttgcat ggtggggtcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcacgaaag acggccagtg cggaagtcca      1260
     atggtgagca cgaaagacgg gaaaatactt ggattacaca gcctagcgaa cttccagaac      1320
     tccatcaatt attttgctgc tttcccagat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcattggaag tataacacta gtgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcaacagca cggcagtata cgcacaa                                          1527
//