ID   AB188928; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188928;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: FRA2.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 5d0b81b283af3adf5ccc327ea44d571b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="FRA2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689R8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689R8"
FT                   /protein_id="BAD38747.1"
FT                   /translation="ADGISRSFMRDYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVVQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGEDELDPNEIRVNRTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPISIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 494 A; 330 C; 364 G; 339 T; 0 other;
     gcagacggaa tatctcggag ctttatgagg gattacggag cactcgaggc agtccaccac        60
     cagagcacca atgacatgag caagttccta aagcttaagg gcaagtggaa taaaacgcta       120
     attacgcgag atgtgttggt tatttgcggg gtgcttggag gaggaatatg gatggttgtt       180
     caacacttac gctcaaaaat ttctgagccc gtaactcatg aggcgaaagg caagaggcaa       240
     agacagaaac tgaagtttcg caatgcccga gacaataaaa tgggcaggga agtgtacgga       300
     gacgacgata ccatagagca tttctttggc gatgcttaca caaagaaagg aaagagcaaa       360
     ggtaggacac gcggcattgg gcacaaaaat aggaagttca tcaacatgta tgggtttgat       420
     cccgaagatt tctctgcagt taggttcgtg gatccactca caggggcgac actagatgat       480
     aacccgttca cagacatcac tcttgtgcaa aagcactttg gtgacattag aatggattta       540
     ctcggagagg atgaactgga cccaaatgaa ataagagtga acagaacaat ccaggcctac       600
     tacatgaaca acaaaacagg caaggcgttg aaggtggatt tgacaccaca catacctctt       660
     aaggtgtgtg accttcacgc aaccattgct ggattccctg agagagagaa tgaattgagg       720
     caaactggaa aggcccaacc tatcagtata gacgaagtgc caagagccaa caacgaactc       780
     gttccagtgg accatgagag caactccatg ttcagaggac tgcgcgacta caacccaatc       840
     tcgaacaaca tttgtcatct tacaaatgta tcagatggag catcaaattc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaat cgacatcttt ttgagcggaa caacggcgag       960
     cttgtaataa agtcacgaca tggtgagttt gtgattaaaa acacaactca gctacatcta      1020
     ctcccaatac cggatagaga tcttttgcta atccgattgc caaaggacat cccgcccttc      1080
     ccgcagaaat taggttttag gcaacctgag aagggtgagc gaatctgcat ggttggatcc      1140
     aacttccaaa ctaagagcat aacgagtata gtctctgaga ctagtacaat aatgccagta      1200
     gagaacagtc agttttggaa acactggatt agtactaaag acggccaatg cggaagtcca      1260
     atggtgagca caaaggacgg gaaaatactt ggattacaca gcctagcgaa ctttcagaac      1320
     tctatcaact actttgctgc tttcccagat gatttcgccg agaagtatct tcacaccatt      1380
     gaagcacatg aatgggtcaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ctgtttaaag taagcaagct aatctcagac      1500
     ctcgatagca cggcagtcta tgcacaa                                          1527
//