ID   AB188927; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188927;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: Eru1D.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 58185fc0a1f4165834a9671bf32b6a9a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Eru1D"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689R9"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689R9"
FT                   /protein_id="BAD38746.1"
FT                   /translation="SDGISRSFMSDYGALEAVHHQSTNEMSKFLKLKGKWNRTLITRDV
FT                   LVICGVLGGGIWMIIQRLQSGITEPVTHEAKGKRQRQKLKFRNARDTKMGREVYGDDDT
FT                   IEHYFGEAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPF
FT                   TDITLVQKHFGDIRTDLLAQDELEPESLQFHKTIQAYYTNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNISDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPNDFAEKYLH
FT                   TFETHEWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 501 A; 310 C; 347 G; 369 T; 0 other;
     tctgacggaa tttcccgaag ttttatgagc gattatgggg cactcgaagc agtacatcat        60
     caaagcacta atgaaatgag taagttcctt aaactgaaag gtaaatggaa cagaacatta       120
     atcacaaggg atgtattggt catatgcggt gttcttggag gtggaatttg gatgataata       180
     cagcgcctgc aatctggaat cacagaacct gtaactcatg aagcaaaagg caagaggcaa       240
     agacaaaaat tgaagtttcg taatgctcga gataccaaaa tgggtagaga agtctacggg       300
     gacgacgaca ccatagaaca ctacttcgga gaagcctaca caaagaaagg aaagagcaag       360
     ggtagaacgc gtggcctcgg tcataaaaac agaaaattca tcaacatgta tggatttgac       420
     cctgaagatt tctccgcagt tagattcgtg gacccactca caggagctac attggatgag       480
     aacccattca cagatatcac ccttgtgcaa aaacactttg gagatatacg aaccgactta       540
     cttgcgcaag atgaactgga gccagaatca ctacaatttc ataaaacaat ccaggcttac       600
     tatacaaaca acaagacggg taaagctttg aaagtggatt tgactccgca catgcctctc       660
     aaggtatgcg atcttcatgc aactattgct ggttttccgg agcgggaatt tgaattgagg       720
     caaactggga aagctcagcc tataagcata gacgaagtgc ctaaggccaa cactgaacta       780
     gtcccagttg atcacgaaag cagttcaatg tttagaggat tgcgtgatta caacccgata       840
     tcaaacaata tttgtcatct cacgaacatt tcagatggtg cgtcaaattc gttgtatgga       900
     gttggttttg ggccactcat attaacaaat cgacaccttt ttgaacgaaa caacggagag       960
     ttattgataa aatcgcgaca tggtgagttt gtgatcaaaa acacaacgca acttcatctt      1020
     ctgccaattc cggacagaga tctattgcta attcgcttgc caaaggacat accacctttt      1080
     ccccaaaaat tggggttcag acaacctgaa aagggggaga ggatttgtat ggtgggttct      1140
     aatttccaga cgaagagcat taccagtgtg gtctcagaga ctagcacagt tatgccagtg      1200
     gagaatagcc aattttggaa acattggatc agtactaagg atggccaatg tggtagcccg      1260
     atggtgagta cgaaggacgg aaagatactt ggattgcata gtctagccaa ttttcaaaac      1320
     tccatcaact atttcgctgc ctttccaaac gactttgccg aaaaatatct ccacacattt      1380
     gagacacacg aatgggtcaa acactggaag tacaacacta gcgggattag ttggggctct      1440
     ctaaacatcc aagcagcgca gccagcaggt ttgttcaaag tgagtaagtt aatatcggat      1500
     cttgatagta cagcagtcta tgcgcaa                                          1527
//