ID   AB188926; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188926;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DNK4.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; f342cdf3003d64652d9ff34688e78cce.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DNK4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S0"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S0"
FT                   /protein_id="BAD38745.1"
FT                   /translation="TDGISRHFMSDYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMIIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQEHFGNIRMNLLGEDELDPNEIRVNRTIQAYYMNNKTGKALKVDLTPHTPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANSELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELIIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFRVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 490 A; 339 C; 357 G; 341 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gattatggag ctcttgaggc agttcatcat        60
     caaaacacca gcgacatgag caaattcctc aagcttaagg gcaaatggaa caaaacgctg       120
     atcacgcgag atgtgttggt gctttgtgga gttcttggag gtggattgtg gatgattatt       180
     cagcacctgc ggtcaaagat ttccgaaccc gtaacccacg aagcgaaagg caagaggcaa       240
     agacagaaac taaagtttcg caatgcccga gataacaaga tgggtagaga agtgtacgga       300
     gatgatgata ccatagagca tttctttggt gatgcctaca caaagaaagg gaagagtaag       360
     ggcaggacac gaggtctcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt ccgtttcgtg gatccactca caggagcgac gttggatgac       480
     aacccgttca cagacatcac ccttgtgcaa gagcactttg gtaacataag aatgaacttg       540
     ctcggggagg atgagctgga cccaaatgaa atacgtgtga ataggacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca cacacctctc       660
     aaggtgtgtg atcttcacgc aaccattgct ggattcccgg agcgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc cattaacata gacgaagtgc caagagctaa tagtgaactc       780
     gtcccagtgg accacgagag taactccatg ttcagaggat tgcgtgacta caacccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatggag catccaactc gttatatgga       900
     gtcggtttcg gaccactcat actaacgaac cgacacctct ttgaacggaa taacggtgaa       960
     ctcataataa aatcacgaca tggtgagttc gtgattaaaa acacaactca gctacatttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggttttag acaacctgag aaaggtgaac gaatttgcat ggtgggatcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaaa ctagcacaat aatgccagtg      1200
     gaaaacagtc agttttggaa acactggatt agcacgaaag acggccaatg cggaagtcca      1260
     atggtgagca cgaaagacgg gaaaatactt ggattacaca gcctagcaaa cttccagaac      1320
     tccatcaatt attttgctgc tttccctgat gattttgccg agaagtatct tcataccatt      1380
     gaagcacacg agtgggtcaa gcattggaaa tataacacta gtgccatcag ctggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcagag taagcaagct aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//