ID   AB188925; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188925;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DNK3.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; dbfd5e62f77b6a7cd1c9e6d6be9c9812.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DNK3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S1"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S1"
FT                   /protein_id="BAD38744.1"
FT                   /translation="TDGISRSFMRDYGALEAVHHQSTNEMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVVQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGEDELDPNETRMNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGTAQPISLDEVPRANNELIPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGESNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQAAQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 500 A; 346 C; 359 G; 322 T; 0 other;
     actgacggaa tatctcggag cttcatgaga gactacggag cactcgaggc agtccaccat        60
     cagagcacta atgaaatgag caagttccta aagcttaagg gcaagtggaa caaaacgcta       120
     atcacgcgag atgtgttggt catttgcgga gtacttggag gaggaatatg gatggttgtc       180
     caacacttac gctcaaaaat ttctgaaccc gtaactcatg aggctaaagg caagaggcaa       240
     agacagaaac tgaaatttcg caacgcccga gacaacaaaa tgggtaggga agtgtatgga       300
     gacgacgaca ccatagagca tttctttgga gatgcttaca caaagaaagg aaagagcaaa       360
     ggcaggacac gtggtatcgg gcataaaaac aggaagttca tcaatatgta tgggtttgat       420
     cctgaagatt tctctgcagt tagattcgta gatccactca caggggcgac actagacgat       480
     aacccattca cggacatcac ccttgtacaa aagcactttg gtgacataag aatggattta       540
     ctcggagagg acgagctgga cccaaatgag acacgaatga acaagacaat ccaggcctac       600
     tacatgaaca ataaaacagg caaggctctg aaggtagact tgacaccaca catacctctt       660
     aaggtgtgtg accttcacgc aaccattgct ggattcccag agagagagaa tgaactgagg       720
     caaactggaa cggctcagcc tatcagttta gacgaagtgc cgagagccaa caacgagctc       780
     atcccagtgg accatgagag caactccatg ttcagagggt tgcgtgacta caacccaatc       840
     tcgaacaaca tctgccatct tacaaatgtg tcagatggag aatcaaactc gttatatggg       900
     gtcggttttg gaccactcat attaacgaac cgacatctct ttgagcggaa caacggcgag       960
     cttgtaataa agtcacgaca tggtgagttt gtgattaaaa acacaactca gctacatcta      1020
     ctcccaatac cagatagaga tcttttgcta atccgattgc caaaggacgt cccacctttt      1080
     ccgcagaaac taggcttcag acaacctgaa aagggtgagc gaatttgcat ggtaggatcc      1140
     aatttccaga ctaagagcat aacgagtata gtctctgaga ctagtacgat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca caaaggacgg aaaaatactc ggactacaca gcctggcgaa cttccagaac      1320
     tccatcaatt actttgccgc tttcccagat gactttgccg agaagtatct tcacaccatt      1380
     gaagcacacg agtgggtcaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ctgaatatac aagcagcgca accatcaggc ttgttcaaag taagcaagtt aatctcagac      1500
     ctcgacagca cggcagtcta tgcacaa                                          1527
//