ID   AB188924; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188924;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DNK2.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; c1aba22ed7ca5f179cf1bdb169aabefb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DNK2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S2"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S2"
FT                   /protein_id="BAD38743.1"
FT                   /translation="TDGISRSFMRDYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGIGHKSRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGGDELDPNEIRMNKTIQAYYMNNKTGKALKVDLTPHMPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANNELVPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGTPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFTEKYLQ
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQAAQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 492 A; 325 C; 366 G; 344 T; 0 other;
     accgacggga tctctcggag tttcatgagg gactacggag cactcgaggc agttcaccat        60
     caaaacacca acgacatgag caagtttctg aagctcaagg gcaagtggaa taaaacgctg       120
     atcacgagag atgtgctggt gatctgcgga gtacttggag gtggaatatg gatggtcatt       180
     caacacttac ggtcaaaaat ttctgaaccc gtaactcatg aagcaaaagg caagaggcaa       240
     agacagaaac tgaagttccg caatgcccga gacaacaaaa tgggtagaga agtgtatggg       300
     gatgatgaca ccatagaaca tttctttgga gatgcctaca caaagaaagg gaagagtaag       360
     ggcaggacac gtggtattgg gcacaaaagt aggaagttca tcaacatgta tgggtttgac       420
     cctgaagatt tctctgcagt taggttcgta gatccactca caggggcgac gctagatgat       480
     aacccattca cggacatcac tcttgtgcaa aagcactttg gtgatataag aatggactta       540
     cttggaggag acgagctcga cccaaatgag atacgtatga acaagacaat ccaggcttat       600
     tatatgaata ataagacagg caaggctttg aaggtggatc taacaccaca catgcccctc       660
     aaggtatgtg accttcacgc aaccattgct ggattcccag agcgagaaaa tgaattgagg       720
     cagactggaa aggctcaacc tatcaacata gatgaagtgc caagagcgaa taacgaactt       780
     gtcccagtgg atcatgagag taactccatg ttcagagggt tgcgcgacta caacccaatt       840
     tcaaacaaca tttgtcatct cacaaacgta tcagatggag catcaaattc gttgtatgga       900
     gtcggttttg gaccactcat attgacgaat cgacacctct tcgagcggaa caacggtgag       960
     cttgttataa aatcacgaca tggagagttc gtgatcaaaa acacaaccca gctgcatttg      1020
     ctaccgattc cggacagaga tctcctgctt atccgtttac cgaaggatat cccaccattt      1080
     ccacagaaac taggcttcag gcaacctgag aagggcgaaa gaatttgcat ggtgggatcc      1140
     aatttccaaa ccaagagcat aacgagtata gtctctgaga ctagcacgat aatgccagtg      1200
     gagaatagtc agttttggaa acactggatc agcactaaag acggtcaatg cggaactcca      1260
     atggtgagca caaaggacgg gaaaatactc gggttacata gcttggcaaa tttccagaac      1320
     tccatcaatt attttgctgc ttttccggat gattttactg aaaagtatct tcaaaccatt      1380
     gaagcacatg agtgggtcaa gcactggaaa tataacacta gcgccatcag ctggggttct      1440
     ttgaacatac aggcagcaca gccttcaggt ttgttcaaag tgagtaaact aatttcagat      1500
     cttgacagca cggcagtcta cgcacag                                          1527
//