ID   AB188923; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188923;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DEU7.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 8774c469e974e6ebd3fbdace7bb28291.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DEU7"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S3"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S3"
FT                   /protein_id="BAD38742.1"
FT                   /translation="TDGISRSFMSEYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGIWMIIQRLQSGITEPVAHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPF
FT                   TDITLVQKHFGDIRATLLEEDELEPEALRFHNTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPINIEEVPKANTELVQVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGIGFGPLILTNRHLFERNNGELLIKSRHGEFVIKNTTQLRL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQAKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPVVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIETHEWVKHWKYNTSGISWGSLKIQAAQPAGLFKVSKLVSDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 485 A; 325 C; 363 G; 354 T; 0 other;
     accgatggga tttctcggag tttcatgagc gagtatggag cactcgaggc agttcatcac        60
     caaagcacca atgatatgag caagttcctt aagcttaagg gcaagtggaa caaaacactg       120
     attacaagag acgttttggt tctttgcggg gtccttggag gtggaatttg gatgatcata       180
     cagcgcctgc agtccggaat tactgaaccc gtagcccatg aggcaaaagg caagaggcag       240
     agacaaaagc ttaaattccg caatgctcga gataataaaa tgggtaggga agtttacggg       300
     gacgatgata ctatagaaca tttctttgga gatgcctaca caaagaaggg aaaaagcaag       360
     ggtaggacac gtggtcttgg tcacaaaaat aggaaattca tcaatatgta tggattcgac       420
     cctgaggatt tttctgcagt tagattcgtg gacccactta caggagcaac attggatgag       480
     aatccgttca cggatataac ccttgtgcaa aaacactttg gagatatacg agccactctg       540
     ctcgaggaag atgaactaga gccggaagca ctgcgatttc ataatacaat tcaggcttac       600
     tatacaaata acaaaacagg caaggctttg aaagtagact tgacaccaca catacccctc       660
     aaagtgtgcg accttcacgc aactattgct ggattcccag agcgagagtt tgaactgagg       720
     caaaccggaa aggctcaacc cataaacata gaggaagtac ctaaagccaa caccgaattg       780
     gttcaagtcg accacgaaag tagttctatg tttagaggac tacgcgacta taacccaata       840
     tcgaacaaca tttgtcatct aacaaatgtt tcggatggag catcaaactc attatatggg       900
     attggttttg gtccactcat actaacaaac cggcatctct ttgaacggaa caatggagag       960
     ctcttgataa agtcacgaca cggtgagttc gtaatcaaga atacaaccca gctccgtctg      1020
     ttgccgatcc cggacagaga cctcctgcta atccgtctac cgaaggacat tccacctttt      1080
     cctcaaaaat tgggattcag acaacctgag aagggggaga ggatatgtat ggtaggatcc      1140
     aatttccaag caaagagtat cactagtgtg gtctcagaga ctagcacagt aatgccagtg      1200
     gagaacagcc agttttggaa gcattggatc agcactaagg acggccaatg tggcagccca      1260
     gtggtgagca cgaaagacgg gaagatactt gggctacaca gtttagctaa tttccaaaac      1320
     tccataaatt atttcgctgc ttttccagat gattttgccg agaagtatct ttatactatc      1380
     gagacacatg aatgggtcaa gcactggaaa tacaacacta gcgggatcag ttggggctcc      1440
     ttaaaaatcc aagcggctca accagcaggt ttgtttaagg ttagcaagtt ggtatcagac      1500
     ctcgacagca cagcggttta cgcgcaa                                          1527
//