ID   AB188921; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188921;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DEU4.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 42a4746106c9212d8df7ec0e3de0ef9f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DEU4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S5"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S5"
FT                   /protein_id="BAD38740.1"
FT                   /translation="TDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVFGGGIWMIIQHLRSKLSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDV
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDISLVQKHFGDIRMDLLGEDELEPDELRMNKTIQAYYMNNKTGKALKVDLTPHVPLKV
FT                   CDLHATIAGFPEREHELRQTGKAQSIDISEIPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLC
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 492 A; 339 C; 353 G; 343 T; 0 other;
     actgacggaa tatcccgtca tttcatgagt gagtatggag cactcgaggc agttcaccac        60
     cagaacacca acgatatgag caaattccta aagctcaagg gcaaatggaa taaaacgtta       120
     atcacacgag acgtgttggt gatctgtgga gtttttggag gcggaatctg gatgataatc       180
     caacacctgc gttcaaaact ttctgaacct gtaacccatg aagcaaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caacgcccga gacaacaaga tgggtagaga ggtgtacgga       300
     gatgacgacg tcatagaaca cttcttcgga gatgcctata cgaagaaggg aaagagcaaa       360
     ggcaggacac gtggcctcgg tcataaaaac aggaaattca tcaacatgta tggatttgat       420
     cctgaagact tctcagcagt caggtttgtg gatccactta cgggagccac actagatgat       480
     aatccgttca cggacatctc ccttgtgcaa aaacactttg gagacattcg aatggatcta       540
     cttggagaag acgaactgga accagatgag ttgagaatga acaagacaat tcaggcctac       600
     tacatgaaca ataaaacagg taaggccctg aaagtggatt tgacaccaca cgtaccactc       660
     aaggtgtgcg atcttcacgc aaccatcgct ggtttcccgg aacgagaaca cgaactcagg       720
     caaactggta aagctcagtc tatagatata agcgaaatac ccaaggctaa tactgagcta       780
     gtcccagttg accacgaaag cagctccatg ttcagagggt tgcgcgatta caacccgata       840
     tctaacaaca tttgtcactt aacaaatgta tcggacggag catcaaactc gttatatggt       900
     gttggttttg ggccactcat actaacgaac cggcatcttt ttgaacggaa taacggtgag       960
     ctagtgatta aatctagaca tggtgagttt gtgatcaaaa acacgactca actccattta      1020
     ctaccgattc cggatcggga cttgctgcta atccggctac cgaaagacat cccacctttc      1080
     ccgcaaaaat taggctttag acaacctgag aagggtgaga ggatctgtat ggtgggatcc      1140
     aacttccaaa ctaagagcat tactagtgtg gtctctgaga ctagcacaat tatgccagta      1200
     gagaacagcc agttttggaa gcattggatt agcactaaag atggccaatg tgggagccca      1260
     atggtgagca caaaggacgg aaagatactt ggcctacata gcctagcaaa tttccaaaat      1320
     tccatcaact attttgctgc cttcccggat gattttgccg agaaatatct ttgcaccatc      1380
     gaagcacatg agtgggttaa acactggaaa tacaacacca gtgcgattag ttggggctcc      1440
     ttaaatatac aagcttcgca accagcaggc ttgttcaaag tgagcaaact catatcagac      1500
     cttgacagca cagcagtgta cgcacaa                                          1527
//