ID   AB188919; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188919;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CZE19.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 4ce7353ebf40d5120b7bd1cb17b422bc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CZE19"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S7"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S7"
FT                   /protein_id="BAD38738.1"
FT                   /translation="TDGISRNFMSEYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMILQRLQSGVTEPVVHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKTKGKTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDESPF
FT                   TDITLVQKHFGDIRTDLIKEDELEPQALQYHKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTELVPVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELIIKSRHGEFVIRNTTQLQL
FT                   LPVPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIEIHDWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 511 A; 330 C; 344 G; 342 T; 0 other;
     acagatggga tttctcgaaa ttttatgagt gaatatggag cgcttgaggc agtccaccat        60
     caaagcacca atgacatgag caagttcctt aagctaaagg gcaaatggaa caaaacgcta       120
     atcacaagag atgttttagt tatctgcggg gttcttggag gtggaatttg gatgatccta       180
     cagcgtctac agtctggagt cactgaaccc gtagtacacg aggcaaaagg aaagaggcag       240
     agacagaagc taaagttccg caacgcccga gacaacaaga tgggcagaga agtctatgga       300
     gatgatgaca ctatagaaca cttctttggg gacgcttaca caaagaaggg aaaaaccaaa       360
     ggtaagacac gtggtcttgg tcacaaaaac aggaaattca ttaacatgta tggatttgat       420
     cctgaagatt tctccgcagt aaggttcgtg gacccactca caggagcgac attagatgaa       480
     agtcctttca cagacatcac tttagtccaa aagcattttg gggacatacg aactgatcta       540
     attaaagaag atgaactcga accacaggca ctacaatatc acaaaacaat ccaagcttac       600
     tacacgaaca acaaaacagg taaggctttg aaagtagact taacaccgca catacctctt       660
     aaggtatgcg atcttcatgc caccattgct ggttttccag aacgagaatt cgagctgagg       720
     cagactggaa aagctcaacc aataagcata gatgaggtgc ccaaagctaa caccgaattg       780
     gtcccggttg atcacgaaag tagttccatg ttcagaggct tgcgcgatta caatccaata       840
     tcaaacaaca tttgtcacct cacaaatgtc tcagatgggg cgtcaaactc attgtatggg       900
     gttggttttg gaccactcat actaacaaac cgacatctct ttgaacggaa taatggagag       960
     ctcataataa aatcgcgaca cggtgagttc gtgatcagga acacaacgca actccagctg      1020
     ctgccagttc cagacaggga cctactgcta attcgattac caaaggacat cccacctttc      1080
     ccgcaaaaac taggattcag acaacctgag aagggagaga gaatctgcat ggtaggatcc      1140
     aacttccaaa cgaagagcat taccagtgtg gtttcagaaa ctagcacaat aatgccagtg      1200
     gagaacagtc aattttggaa gcattggatt agcacaaaag atggccaatg tggcagccca      1260
     atggtaagta caaaggacgg aaagatactt ggattgcaca gtctagccaa tttccaaaac      1320
     tccatcaatt atttcgctgc tttcccagat gatttcgccg agaaatacct ctacacaatc      1380
     gagatacatg attgggtcaa gcactggaag tataacacta gcgggattag ttggggctct      1440
     ttgaatattc aagcagcaca accagcaggt ctattcaagg tgagcaagtt gatatcagat      1500
     ctcgatagta cagcggttta cgcgcaa                                          1527
//