ID   AB188918; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188918;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CZE18.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; f7c5e93c306c3d4135dff97e426335b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CZE18"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689S8"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689S8"
FT                   /protein_id="BAD38737.1"
FT                   /translation="TDGISRSFMRDYGALEAVHHQNTNDMSKFLQLKGKWNKTLITRDV
FT                   LVICGVLGGGIWMIIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IEHFFGEAYTKKGKSKGRTRGIGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQKHFGDIRMDLLGEDGLDPNEIRMNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPISIDEVPRANNELIPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSEGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQAAQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 501 A; 350 C; 362 G; 314 T; 0 other;
     accgacggga tctctcggag tttcatgagg gactacggag cactcgaggc agttcaccat        60
     caaaacacca acgacatgag caagtttctg cagctcaagg gcaagtggaa taaaacgctg       120
     atcacgagag atgtgctggt gatctgcgga gtacttggag gtggaatatg gatgatcatt       180
     caacacttac ggtcaaaaat ttctgaaccc gtaactcacg aagcaaaagg caagaggcaa       240
     agacagaaac tgaagttccg caatgcccga gacaacaaaa tgggtagaga agtgtatggg       300
     gatgatgaca ccatagagca tttctttgga gaagcttaca caaagaaagg aaagagcaaa       360
     ggcaggacac gtggcatcgg gcataaaaac aggaagttca tcaatatgta tgggtttgat       420
     cctgaagatt tctctgcagt tagattcgta gatccactca caggggcgac actagacgat       480
     aacccattca cggacatcac ccttgtgcaa aagcactttg gtgacataag aatggattta       540
     ctcggagagg acgggctgga cccaaatgag atacgaatga acaagacaat ccaggcctac       600
     tacatgaaca ataaaacagg caaggctctg aaggtagact tgacaccaca catacctctc       660
     aaggtgtgtg accttcacgc aaccattgct ggattcccag agagagagaa tgaactgagg       720
     caaactggaa aggctcagcc tatcagtata gacgaagtgc cgagagccaa caacgaactc       780
     atcccagtgg accacgagag caactccatg ttcagagggt tgcgcgacta caacccaatc       840
     tcgaataaca tctgccatct cacaaatgtg tcagaaggag catcaaactc gttatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacatctct ttgagcggaa caacggcgag       960
     cttgtaataa agtcacgaca tggtgagttt gtgattaaaa acacaactca gctacatcta      1020
     ctcccaatac cagatagaga tcttttgcta atccgattgc caaaggacat cccacctttt      1080
     ccgcagaaac taggcttcag acaacccgaa aagggtgagc gaatttgcat ggtaggatcc      1140
     aatttccaga ctaagagcat aacgagtata gtctctgaga ctagtacgat aatgccagtg      1200
     gagaacagtc agttttggaa acactggatt agcactaaag acggccaatg cggaagtcca      1260
     atggtgagca caaaggacgg gaaaatactc gggctacaca gcctggcgaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gactttgccg agaagtatct tcacacaatt      1380
     gaagcacacg agtgggttaa gcactggaag tataacacta gcgccatcag ttggggctct      1440
     ctgaatatac aagcagcgca accatcaggc ttgttcaaag taagcaagtt aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//