ID   AB188913; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB188913;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: AllA.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; bb2d0a191c6e39345052b82dce07daf8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="AllA"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689T3"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q689T3"
FT                   /protein_id="BAD38732.1"
FT                   /translation="TDGISRSFMSEYGALEAVHHQSTNDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGIWMIIQRLQSGITEPVAHEAKGKRQRQKLKFRNARDSKMGREVYGDDDT
FT                   IEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDENPF
FT                   TDITLVQKHFGDIRATLLEQDELEPEALQFHKTIQAYYTNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPEREFELRQTGRAQPINIEEVPKANTELVQVDHESSSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGIGFGPLILTNRHLFERNNGELLIKSRHGEFVIKNTTQLRL
FT                   LPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQAKSITSVVSETSTVMP
FT                   VENSQFWKHWISTKDGQCGSPVVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLY
FT                   TIETHEWVKHWKYNTSGISWGSLKIQAAQPAGLFKVSKLVSDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 487 A; 326 C; 360 G; 354 T; 0 other;
     accgatggga tttctcggag tttcatgagc gagtatggag cactcgaagc agttcatcac        60
     caaagcacca atgacatgag caagttcctt aagcttaagg gcaagtggaa taaaacactg       120
     attacaagag atgttttggt tctttgcggg gtccttggag gtggaatttg gatgatcata       180
     cagcgcctgc agtccggaat tactgaaccc gtagcccatg aggcaaaagg caagaggcag       240
     agacaaaagc ttaaattccg caatgctcga gatagcaaaa tgggtaggga agtttacggg       300
     gacgatgata ctatagaaca tttctttgga gatgcctaca caaagaaggg aaagagcaag       360
     ggtaggacac gtggtctcgg tcacaaaaat aggaaattca tcaatatgta tggattcgac       420
     cctgaggatt tttctgcagt tagattcgtg gacccactta caggagccac attggatgag       480
     aatccgttca cggatataac ccttgtgcaa aaacactttg gagatatacg agccactttg       540
     ctcgagcaag atgaactaga gccggaagca ctgcagtttc acaagacaat tcaggcttac       600
     tatacaaata acaaaacagg caaggctttg aaagtagact tgacaccaca catacctctc       660
     aaagtgtgcg accttcacgc aactattgct ggattcccag agcgagaatt tgaactgagg       720
     caaactggaa gggctcaacc tataaacata gaggaagtac ctaaagccaa caccgaattg       780
     gttcaagtcg accatgaaag tagttctatg tttagaggat tacgcgacta caacccaata       840
     tccaacaaca tttgtcacct aacaaatgtt tcagatggag catcaaactc attatatggg       900
     attggttttg gtccactcat actaacaaac cggcatctct ttgaacgaaa caatggagag       960
     ctcttgataa agtcacgaca cggtgagttc gtaatcaaga atacaacaca gctccgtctg      1020
     ttgccgatcc cagacagaga cctcctgcta atccgcctac caaaggacat tccacctttt      1080
     cctcaaaaat taggattcag acaacccgag aagggggaga ggatatgtat ggtaggatcc      1140
     aattttcaag caaagagtat cactagtgtg gtttcagaga ctagcacagt aatgccagtg      1200
     gagaacagcc agttctggaa gcattggatc agcactaagg acggccaatg tggcagccca      1260
     gtggtgagca cgaaagacgg gaagatactt gggctacaca gtttagctaa tttccaaaac      1320
     tctataaatt atttcgctgc ttttccagat gattttgccg agaagtatct ctatactatc      1380
     gagacacatg agtgggtcaa gcactggaaa tataacacta gcgggatcag ttggggctcc      1440
     ttaaaaatcc aagcggctca accagcgggt ttgtttaagg ttagcaagtt ggtatcagac      1500
     ctcgacagca cagcggtcta cgcgcaa                                          1527
//