ID   AB188912; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188912;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: PRT1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 76f665cdf16a6450e8a1fd1e5741f6b4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PRT1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689T4"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689T4"
FT                   /protein_id="BAD38731.1"
FT                   /translation="MAAVTFASAITNAITNKSASTGMVQFGSFPPMPLRSTTVTTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKLKRARER
FT                   RRAQQPIMLKWEPKLSGISIGGGLSASAIEAEEVHTKWPLHKTPSMKKKMVHRTCRMNG
FT                   QGIDMLTRSLVKISKAKSTNIEYIGRKSIKVDFVRKERMKFARVQVAHLLGKRAQRDLS
FT                   AGVEENHFIDILSDYSGNKATMTPGTVCAGWSGIIVRNGSLTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 349 A; 243 C; 287 G; 207 T; 0 other;
     atggcagcag ttacattcgc atcagcaatc accaacgcca tcaccaacaa atcagcatcc        60
     accggaatgg tacagtttgg gagcttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgcta ccccagtagc gcaacctaag ctgtacacag tacagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccaaaccg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt cttagactgg       360
     gaagccagtt tgaagagaag ctcgtatgga attgctgaga acgagaaggt cgtaatgaca       420
     actcgtggtg tcagcaagat agtgcccaga agttcaaggg cgatgaaact aaagcgcgca       480
     agagagagac gtagggcgca gcaaccgatc atgctaaagt gggagcccaa actgagcggg       540
     atctcaattg gaggaggact ttctgcaagt gctattgaag cagaggaagt tcacacaaag       600
     tggccacttc acaaaacacc gtcgatgaag aagaagatgg tgcacagaac atgcaggatg       660
     aatggtcaag gaattgacat gttaacacgc tccctggtta agatctccaa ggcgaaaagc       720
     accaacatcg agtatatcgg aaggaagtca atcaaggttg atttcgttag gaaagagcga       780
     atgaaattcg caagagtcca agtagcacac ttactcggaa agcgagcaca gcgtgacttg       840
     tcagctggag tggaggaaaa ccactttatt gacattctca gtgactactc aggcaataaa       900
     gcaaccatga ccccaggaac agtgtgtgca ggttggagtg ggataatcgt tagaaatgga       960
     agtctaaccc agaaacgaag caggagtcca tcagaggctt ttgttatcag aggtgaacat      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacaaaga caatgagtca caagatcgtg      1080
     catttt                                                                 1086
//