ID   AB188911; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188911;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: POL4.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 2cce3f829ccb01ee3c975f436294a4a1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="POL4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689T5"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689T5"
FT                   /protein_id="BAD38730.1"
FT                   /translation="MAAVTFASVITSAIINKPTSTGMVQFGSFPPMPLRSTTITTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETGLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPITLKWEPKLSEFSIGGGSSASAIEAEEVRTKWPLHKTPSLKKRMVHKTCKMSD
FT                   QGVDMLIRSLVKIFKDKSANIEHIRKKSIKADFIRKERTKFARVQVAHLLGKRAQRDLV
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVRNEVLTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKTMSLKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 346 A; 238 C; 288 G; 214 T; 0 other;
     atggcagcag tcacatttgc atcagtaatc accagcgcca tcattaacaa acctacatcc        60
     accggaatgg tacagttcgg gagcttccca ccaatgccat tacgttccac caccatcacc       120
     acagtcgcca ctccagtggc acaacctaaa ctatacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccaagtcg       300
     agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaaaccggtc taaagagacg ctcgcatgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggcg ttagtaagat agtgcccaga agttcaaggg cgatgaagca aaagcgcgca       480
     agagagaggc gtagagcaca gcaaccaatc accctaaaat gggagcccaa attgagtgag       540
     ttctcaattg gaggaggatc ttctgcgagt gcgattgaag cagaggaagt tcgcacaaag       600
     tggccacttc acaagacacc gtcattgaag aagagaatgg tgcacaagac atgcaagatg       660
     agcgatcaag gagttgatat gttaatacgc tctctggtta agatcttcaa ggataagagc       720
     gccaacatcg agcacatcag aaagaagtca attaaggctg atttcattag gaaagagcga       780
     acgaagttcg caagagttca agtagcacac ttgctcggaa agagagcaca gcgcgatttg       840
     gtagccggag tggaagagaa ccactttatt gacattctca gcgagtactc aggcaacaaa       900
     acagtcataa acccaggagt agtatgtgcc ggttggagcg gagtgattgt taggaacgaa       960
     gttctaactc agaaacggag cagaagtcca tcaaaagctt ttgtaatcag gggtgagcac      1020
     gaaggcaagt tgtatgatgc caggatcaag atcacaaaaa cgatgagtct taagatcgtg      1080
     catttc                                                                 1086
//