ID   AB188908; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188908;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: NLD2.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 546f3b00bace1b0973f2021e9acbdef3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NLD2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689T8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689T8"
FT                   /protein_id="BAD38727.1"
FT                   /translation="MAAVTFASAITNAITSKPALTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGVAENEKVVMTTRGVSKIVPRSSRAMKQRRARER
FT                   RRAQQPIILKWEPKLSGISIGGGFSASAIEAEEVRTKWPLHKTPSMKKRTVHRICKMND
FT                   QGVDMLTRSLVKIFKTKSANIEYIGKKLIKVDFIRKERTKFARVQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRDGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 341 A; 234 C; 297 G; 214 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca tcaccagcaa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaagctagtt tgaagagaag ctcgtatgga gttgctgaga acgagaaggt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaggcgcgca       480
     agggagaggc gtagagcgca gcaaccgatt atactaaagt gggagcccaa attgagcggg       540
     atctcaatcg gaggagggtt ctctgcgagc gcgatcgaag cagaagaggt tcgcacgaag       600
     tggccgcttc ataagacacc gtcaatgaaa aagaggacgg tgcacagaat atgcaagatg       660
     aacgaccaag gagttgacat gttgacacga tccctggtta agattttcaa gactaagagt       720
     gccaacattg agtacattgg aaagaagttg atcaaggtcg atttcatcag aaaagaacgg       780
     acgaagttcg caagagtcca agtagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tggaagaaaa ccattttatt gacattctca gcgggtactc aggtaataaa       900
     acaaccataa atccaggagt agtttgcgca ggttggagtg gcatagtcgt tagagatgga       960
     attctaaccc agaaacgaag cagaagtcca tcagaggcct ttgtgattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacgaaga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//