ID   AB188907; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188907;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: NLD1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 88d9a98839171f0bfa0bf97138021d82.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NLD1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689T9"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689T9"
FT                   /protein_id="BAD38726.1"
FT                   /translation="MAAVTFASVITNAITNKPASTGMVQFGSFPPMPLRSTAVTTIATS
FT                   VAQPKPYTVQFGSLDPVIVKGGVGSFAKVTRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTHGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGFSIGGGLSASAIETEEVRTKWPLHKTPSMKRKTVHRMCKMND
FT                   QGVDMLTRSLVKIFKAKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLL
FT                   TGVEENRFIDILSGYSGNKTTMNPGVVCAGWSGIVVRKGILTQKQSRSPSDAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 346 A; 239 C; 290 G; 211 T; 0 other;
     atggcagcag ttacattcgc atcagtcatc accaacgcca tcaccaacaa accagcatcc        60
     accggaatgg tacagtttgg gagtttccca ccgatgccat tgcgatccac cgctgttacc       120
     acaatcgcca cctcagtggc gcagcctaaa ccgtacacag tgcagtttgg aagccttgac       180
     ccagtaatcg tcaagggtgg agtagggtcc tttgctaagg tgacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acccagaccg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaagctagtt tgaagagaag ctcgtatgga attgccgaaa acgagaaggt tgtaatgaca       420
     actcatggcg ttagcaagat agtgcccaga agttcaaggg cgatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca acaaccaatc atactaaagt gggaacccaa attgagcggg       540
     ttctcaattg gaggagggct ctctgcgagc gcgatcgaaa cagaggaagt tcgcacaaag       600
     tggccacttc acaagacacc gtcaatgaag aggaagacgg tgcacagaat gtgcaagatg       660
     aacgaccaag gagttgacat gttgacacga tccctggtta agattttcaa ggctaagagt       720
     gccaacattg agtacattgg aaagaagtcg atcaaggttg atttcatcag aaaagaacga       780
     acgaaattcg caagaatcca agtagcacac ttactcggga agcgagcaca acgtgacttg       840
     ttaactggag tggaagaaaa ccgctttatc gacatcctca gcgggtactc aggtaacaaa       900
     acaaccatga acccaggagt agtatgcgca ggttggagtg gtatagtcgt tagaaaggga       960
     atcctaaccc agaagcaaag caggagtcca tcagatgcct ttgttattag aggtgaacac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gttacgaaaa caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//