ID   AB188905; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188905;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA8.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 5305b0016ad956c7e7607f16dd47be09.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA8"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U1"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U1"
FT                   /protein_id="BAD38724.1"
FT                   /translation="MAAVTFASAITNATINKPASTGMVQFGNFPPVPLRTTATTTVATP
FT                   VAQPKLYTVQFGNLDPVVVKGGAGSSAKTTRQQPNVEIDVSLREVAALEVAKPKPNAVL
FT                   RMHEEANKERALFLDWETSLKRRPYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLRWEPQASQFSIGGGPAANIIEAEEVRTKWPLHKTPSMKQKMEFKARKMSS
FT                   QGIDMLTRSLIKIFKAKNAAIEYTAKKSIDIDFVRKERTKFARIQVAHLLGKRAQRDLL
FT                   TGAEENHFIDILSDYSGNKRVINPGMVRAGWSGLVVRHGVLTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIVHY"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 343 A; 257 C; 288 G; 198 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc actaacgcca ccatcaacaa accagcatcc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgaaccac cgccaccacc       120
     acagtcgcca ctccagtggc gcaacccaaa ttgtacacag tacagtttgg aaaccttgac       180
     ccagtagtag ttaagggtgg agcagggtcc tctgctaaga caactcgcca gcagcctaac       240
     gttgaaatag acgttagcct cagggaagtc gcagctttgg aggttgcaaa acccaagcca       300
     aacgccgtgt tgaggatgca cgaagaagct aacaaggagc gagcgctctt cttagactgg       360
     gaaactagtc tgaaaagaag accatacgga atcgctgaga atgagaaggt cgtgatgacc       420
     actcgtggtg tcagcaagat agtgcccagg agttcgcggg caatgaagca gaagcgcgca       480
     agagagagac gcagagcaca acaaccaatt gtgctaagat gggaaccaca ggcaagccaa       540
     ttctctattg gagggggacc tgccgcaaat ataattgagg cagaggaggt ccgcacgaag       600
     tggccactac acaagacacc atcaatgaag cagaagatgg agttcaaggc acgcaagatg       660
     agcagccaag gcatcgacat gctgacgcgc tccctaatca agatcttcaa ggcaaagaat       720
     gccgccatcg agtacaccgc aaagaaatct attgacatag actttgttag aaaggagcgg       780
     acgaagtttg ctagaatcca agtcgcacac ttgctcggga aacgagcaca acgtgattta       840
     ctgactggag cggaggaaaa ccactttatt gatatcctga gtgactactc aggcaacaag       900
     agagtcataa acccaggaat ggtgcgtgct ggctggagtg gattggtcgt gagacacggc       960
     gtcctaactc agaaacagag tagaagccca tcacaagcat ttgtgattag gggtgagcac      1020
     gaaggcaaat tgtacgacgc tagggtgaaa gtcacaaagg ttatgagtca taagatcgtg      1080
     cattat                                                                 1086
//