ID   AB188904; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188904;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA6.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 8fbf3ac6ffe241de52dc7bfacb0039de.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA6"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U2"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U2"
FT                   /protein_id="BAD38723.1"
FT                   /translation="MAAVTFASAITNATINKPASTGMVQFGNFPPVPLRTTATTTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGEAGSSAKTTRQQPNVEIDVSLREVAALEVAKPKPNAVL
FT                   RMHEETNKERALFLDWETSLKRRPHGIAENEKVVMTTRGVSKIVPRSSRAMKLKRARER
FT                   RSSQKPIVLKWEPKLSEISIGGGPSASELEAEEARTKWPLHKTPSTKKKMARKACRMNS
FT                   QGIDMLMRSLIKIFKAKSANIEYVGRKSIKIDFVKKEQAKFARVQVAHLLGKRAQRDLS
FT                   TGIEENRFIDILSGYSGDKRVINPGVVCAGWSGVIVRNGVLAQRQSRSPSRAFVIRGEH
FT                   EGKLYDARIKITKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 356 A; 227 C; 280 G; 223 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc actaacgcca ccatcaacaa accagcatcc        60
     accggaatgg tacagttcgg aaatttccca ccagtgccgt tacgaaccac cgccactacc       120
     acagtcgcca ctccagtggc gcaacccaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagttg ttaagggtga agcagggtcc tctgctaaga caacccgcca gcagcctaac       240
     gttgaaatag atgttagcct cagggaagtc gcagctttgg aggttgcaaa acccaaacca       300
     aacgccgtgt tgaggatgca cgaggaaact aacaaggagc gagcactctt tttagactgg       360
     gaaactagtt tgaaaagaag accacatggc atcgccgaga atgagaaggt cgtgatgact       420
     actcgtggtg ttagcaaaat agtacccagg agttcgaggg cgatgaagct aaagcgcgca       480
     agagagaggc gtagctcgca gaaaccaatt gtgttaaagt gggagcccaa attgagtgaa       540
     atctcgattg gaggaggacc ctctgcaagt gaacttgaag cagaggaagc tcgtacaaaa       600
     tggccactac acaagacacc gtcaacgaag aagaagatgg cgcgcaaagc gtgtagaatg       660
     aatagtcaag gaattgacat gttaatgcgt tccttgatta aaatcttcaa agcaaagagc       720
     gccaacattg agtacgtcgg aaggaagtct atcaagatag actttgtaaa gaaagagcaa       780
     gcaaaatttg ctagagttca agttgcacat ttacttggaa agagagcaca gcgcgacttg       840
     tcaactggaa tagaggaaaa ccgctttatt gacattctaa gtggctactc aggtgacaag       900
     agagttataa acccaggagt ggtttgcgct ggctggagtg gggttattgt tagaaatgga       960
     gttctagccc agagacagag caggagtcca tcaagggctt ttgtaatcag aggtgaacac      1020
     gaaggcaaat tatatgatgc cagaattaaa atcacgaaaa cgatgagtca taagatagtg      1080
     catttt                                                                 1086
//