ID   AB188903; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188903;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA5.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 88a46286455f7ae35b66fe952f8be20f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA5"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U3"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U3"
FT                   /protein_id="BAD38722.1"
FT                   /translation="MAAVTFASAITNATISKSTSTGMVQFGNFPPVPLRTTAITTVATP
FT                   VAQPKLHTVQFGSLDPVVVKGGAGSSAKTTRQQPNVEIDVSLREVAALEVAKPKPNAVL
FT                   RMHEETNKERALFLDWETNLKRGSYGIAENEKVVMTTRGVSKIVTRSSRAMKQKRARER
FT                   RNSQKPIVLKWEPKLSETSIGGGPSASKLEAEEARTKWPLHKTPSAKKKTVHRVCRMNN
FT                   QGIDMLMRSLIKIFKAKSANIEYTGRKSIKIDFVRKEQIKFARVQVAHLLGKRAQRDLL
FT                   TGVEENRFIDILSGYSGNKKVINPGMICAGWSGVIVRNGILTQKQSRSPSRAFVIRGEH
FT                   EGKLYDARIKVTKMMSHKMVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 358 A; 224 C; 280 G; 224 T; 0 other;
     atggcagcag tcacattcgc atcagcgatc acaaacgcca ccatcagcaa atcaacatcc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgaaccac cgccattacc       120
     acagtcgcca ctccagtggc gcaacccaaa ttgcatacag tgcagtttgg aagccttgac       180
     ccagtagttg tcaagggtgg agcagggtcc tctgctaaga caacccgcca gcagcctaac       240
     gttgaaatag atgttagcct cagggaagtc gcagctttgg aggttgcaaa acccaagcca       300
     aacgccgtgt tgaggatgca cgaggagact aacaaggagc gagcgctctt tttggactgg       360
     gaaaccaacc tgaaaagagg atcatatggc atcgctgaga atgagaaggt cgtgatgact       420
     actcgtggtg tcagcaaaat agtaaccagg agttcgaggg cgatgaagca aaagcgcgca       480
     agagagaggc gcaactcgca gaaaccaatt gttttaaagt gggagcccaa attgagtgaa       540
     acctcgattg gaggaggacc ctctgcaagc aaacttgaag cagaggaagc tcgtacaaag       600
     tggccactac acaaaacgcc gtcagcgaag aaaaagacgg tgcacagagt gtgtagaatg       660
     aataaccaag gaattgacat gttgatgcgt tccttgatca aaattttcaa agcaaagagc       720
     gccaacattg agtacactgg aaggaagtct atcaagatag actttgtaag gaaagagcaa       780
     ataaagtttg ctagagttca agttgcgcat ttacttggaa agagagcaca gcgtgacctg       840
     ttgactggag tagaagaaaa ccgctttatt gacattttaa gtggctattc aggtaacaag       900
     aaagttataa acccaggaat gatttgcgct ggctggagtg gagttattgt cagaaatgga       960
     attctaaccc agaaacagag caggagtcca tcaagagctt ttgtaatcag aggtgaacac      1020
     gaaggcaaat tatacgatgc cagaattaag gttacgaaaa tgatgagtca taaaatggtg      1080
     catttc                                                                 1086
//