ID   AB188902; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188902;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ITA4.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; cc0f49408ff89db6ce7f4343d2c08533.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U4"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U4"
FT                   /protein_id="BAD38721.1"
FT                   /translation="MAAVTFASAITNATINKPAFTGMVQFGNFPPVPLRTTATTTVATP
FT                   VAQPKLYTMQFGSLDPVIVKGGAGSSAKTTRQQPNVEIDVSLREVAALEVAKPKPNAVL
FT                   RMHEETNKERALFLDWETSLKRRPHGIAENEKVVMTTHGVSKIVPRSSRAMKLKRARER
FT                   RSSQKPIVLKWEPKLSEISIGGGPSASELEAEEARTKWPLHKTPSTKKKTAHKACRMNS
FT                   QGVDMLMRSLIKIFKAKSANIEYIGRKSIKIDFVKKEQVKFARVQVAHLLGKRAQRDLL
FT                   TGVEENRFIDILSGYSGDKRVINPGVVCAGWSGVIVRNGVLAQKQSRSPSRAFVIRGEH
FT                   EGKLYDARIKITKMMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 353 A; 229 C; 280 G; 224 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc actaacgcca ccatcaacaa accagcattc        60
     accggaatgg tacagttcgg gaatttccca ccagtaccgt tgcgaaccac cgccactacc       120
     acagtcgcca ctccagtggc gcaacccaaa ctgtacacaa tgcagtttgg aagccttgac       180
     ccagtaattg tcaagggtgg agcagggtcc tctgctaaga caacccgcca gcagcctaac       240
     gttgaaatag atgttagcct cagggaagtc gcagctttgg aggttgcaaa acccaagcca       300
     aacgccgtgt tgaggatgca cgaggaaact aacaaggagc gagcgctctt tttagactgg       360
     gaaactagtt tgaaaagaag accacatggc atcgccgaga atgagaaagt cgtgatgact       420
     actcatggtg ttagcaaaat agtacccagg agctcgaggg cgatgaagct aaagcgcgca       480
     agagagaggc gtagctcgca gaaaccaatt gtgttaaagt gggagcccaa attgagtgaa       540
     atctcgattg gaggaggacc ttctgcaagc gaacttgaag cagaggaagc tcgtacaaag       600
     tggccactac acaaaacacc gtcaacgaag aagaagacgg cgcacaaagc gtgtagaatg       660
     aatagtcaag gagttgacat gttaatgcgt tccttgatta aaatcttcaa agcaaagagt       720
     gccaacattg aatacatcgg aaggaagtct atcaagatag actttgtgaa gaaagagcaa       780
     gttaaatttg ctagagttca agttgcacat ctacttggaa agagagcaca gcgcgacttg       840
     ttaactggag tagaggaaaa ccgctttatt gacattctga gtggctactc aggtgacaag       900
     agagttataa acccaggagt ggtttgcgct ggctggagtg gcgtcattgt tagaaatgga       960
     gttctagccc agaaacagag caggagtccc tcaagggctt ttgtgatcag aggtgaacac      1020
     gaaggcaaat tatatgatgc cagaattaaa atcacgaaaa tgatgagtca taagatagtg      1080
     catttt                                                                 1086
//