ID   AB188900; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188900;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC45.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 77a004088f451f24a519f317a3a0d642.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC45"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U6"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U6"
FT                   /protein_id="BAD38719.1"
FT                   /translation="MAAVTFAPAITNAITNKSASTGMVQFGNFPPVPLRSAIATTVVTS
FT                   VVQPKLCTMQFGSLDPVIVKGVAGSSAKETRQQLNVKEDVNLRGTAALEVVKPHPSIEE
FT                   RMQEEARKERAIFLDLENRLGRRPYGIAENEKIIMTARGVSKIVPRSTRAMKHKRARDR
FT                   RNSQQPIVLKWEPKSSEISIGGGPSASETEAEEVRTKWPLHKTPSMKKKTVRKVCRMND
FT                   QGTDMLTRSLIKIFKAKNASIEYTHRKSIKIDFVRRERTKFARVQVAHLLGKRAQRDLS
FT                   TGLEENRFIDVLSDYSGSKRTIKSGVVRAGWSGIIVKSGTLIQKRSRSPSKAFVIRGEH
FT                   EGKLYDARVKVTKMRSHKIIHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 349 A; 228 C; 289 G; 220 T; 0 other;
     atggcagcag tcacattcgc accagcaatc accaacgcca tcaccaacaa atcagcatcc        60
     accggaatgg tacagtttgg gaacttccca ccagtgccgt tgcgatccgc catcgccacc       120
     acagtcgtca catcagtggt gcaacccaaa ttgtgcacaa tgcaatttgg aagcctcgac       180
     ccagtaatcg tcaagggtgt agcagggtcc tctgctaagg aaacccgcca gcagcttaac       240
     gttaaagaag acgttaacct cagggggacc gcggctttgg aggttgtgaa accccatccg       300
     agtattgaag agaggatgca agaggaggca aggaaagaga gggcaatttt cctagatctt       360
     gaaaatagac tgggaaggcg cccatatggc attgctgaga acgagaagat catcatgaca       420
     gctcgtggcg tcagcaaaat agtgcccagg agtactagag caatgaagca caaacgtgct       480
     agagataggc gcaattcaca gcagccaatc gtgctaaaat gggaacccaa atcaagtgaa       540
     atctcaattg gaggaggacc ctccgcaagt gaaactgagg cagaggaagt tcgcacaaag       600
     tggccgttgc acaagacacc gtcaatgaag aaaaagacgg tgcgtaaagt gtgcagaatg       660
     aatgaccaag gaactgacat gttgacgcgt tccttgatta agattttcaa ggcaaagaat       720
     gccagcattg agtacaccca caggaagtct atcaagatag actttgtgag gagagagcga       780
     acaaagtttg ctagagttca ggttgcgcat ttgcttggga agagagcaca gcgcgatttg       840
     tcaactggat tagaggaaaa ccgctttatc gatgtcttaa gtgactattc aggaagtaag       900
     agaactataa aatcaggagt agtgcgcgct ggttggagtg gtatcattgt taagagtggg       960
     actttaatcc agaaacggag cagaagcccg tcgaaagcct ttgtaatcag aggtgaacac      1020
     gaaggcaaat tgtatgatgc cagggttaag gtcacaaaaa tgaggagcca taagattata      1080
     catttt                                                                 1086
//